PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021666673.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

LBD

Protein Properties

Length: 147aa MW: 15632.3 Da PI: 6.0549

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021666673.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	41.1	5.2e-13	71	120	1	50
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalp 50 +C aCk+ +++C+++C +a y+p ++++kf +v + Ga+n++++l++ + XP_021666673.1 71 PCTACKIRGQRCSDKCYVASYLPPTDSHKFTVVDGMLGATNIVSFLQNNN 120 7*********************************************9865 PP

Sequence ? help Back to Top
Protein Sequence Length: 147 aa Download sequence
MGNNNHDLSP FLFSSPPYAQ FPSPPFSLSS SPSLSPSLNT PFESSQSLPL HTAQSSSSSF 60 HPSAATANLG PCTACKIRGQ RCSDKCYVAS YLPPTDSHKF TVVDGMLGAT NIVSFLQNNN 120 SSSYVPLLLL LRDISSQDGE LQADTST

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28500.1	3e-16	LBD family protein