PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021667120.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

NF-YC

Protein Properties

Length: 255aa MW: 28255.8 Da PI: 5.9359

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021667120.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	176.3	3e-55	76	179	1	101
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92 ql++fw++q ie+atdfknh+lPlarikki+kadedv+misaeaPv++++ace+fileltlrsw+h+ enkrrtl+k+diaaa+trt+ifdfl XP_021667120.1 76 QLQTFWTNQyqeIEQATDFKNHSLPLARIKKIMKADEDVRMISAEAPVIFARACEMFILELTLRSWNHTGENKRRTLQKNDIAAAITRTEIFDFL 170 89****99999****************************************************************************** PP NF-YC 93 vdivprdel 101 vdivpr++l XP_021667120.1 171 VDIVPREDL 179 ****987 PP

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence
MDQRGHAQAS AAGEVGSTAP VPYGISSYQP KQMMGPAASG SLQSAAQPSG VAASQAQHQL 60 AYQHIHQQQQ EQLQQQLQTF WTNQYQEIEQ ATDFKNHSLP LARIKKIMKA DEDVRMISAE 120 APVIFARACE MFILELTLRS WNHTGENKRR TLQKNDIAAA ITRTEIFDFL VDIVPREDLK 180 DEVLASVPRG SLPVGGPAEA IPYYYMSPQF APQVAAPGMS VGQPVVDQNL YGQQTRPYVT 240 QPIWPQQQQQ PPSDS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	149	155	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G08970.3	3e-78	NF-YC family protein