PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021667217.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HD-ZIP

Protein Properties

Length: 185aa MW: 20969.8 Da PI: 8.492

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021667217.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	54.8	1.6e-17	18	71	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 +++++t++q++ Le+ F +n+++ e + +LA++lg++ rqV +W+qN++a++k XP_021667217.1 18 NKRRLTQDQVRLLERTFTSNKKLEPELKLQLANQLGVPPRQVAIWYQNKKARWK 71 56789************************************************9 PP
2	HD-ZIP_I/II	105.2	5.2e-34	18	109	2	93
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93 +krrl+++qv+lLE++F++++kLepe K +la++Lg+ prqva+W+qn++AR+kt+ lE dy++++ ++++ ++++rLekev +Lreel++ XP_021667217.1 18 NKRRLTQDQVRLLERTFTSNKKLEPELKLQLANQLGVPPRQVAIWYQNKKARWKTQSLELDYNTIQVKLENALADKRRLEKEVIQLREELRK 109 79***************************************************************************************986 PP

Sequence ? help Back to Top
Protein Sequence Length: 185 aa Download sequence
MDFFQSQSQQ KHLPKNSNKR RLTQDQVRLL ERTFTSNKKL EPELKLQLAN QLGVPPRQVA 60 IWYQNKKARW KTQSLELDYN TIQVKLENAL ADKRRLEKEV IQLREELRKA QEMVFAFNQG 120 IVPSHPHHFH PPPPPPPPLN VSCNSSCDEG GGGSSLHEDV NGEVLQLDEL YACLIGPGAG 180 GSTWG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G53980.1	1e-43	HD-ZIP family protein