PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021667374.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family YABBY
Protein Properties Length: 243aa    MW: 27329.3 Da    PI: 8.5504
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021667374.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY156.22.7e-48101712165
           YABBY   2 dvfssseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqllaaeshldeslkeelleelkveeenlksnvekeesastsv 96 
                     +++  se++Cyv+CnfCnt+lav +P + l+ +vtv+CGhC++l  ++ +k  +     s    s++++ + +  +++ +l+++   ++  + + 
  XP_021667374.1  10 ELVPPSEHLCYVRCNFCNTVLAVGIPCKRLLDTVTVKCGHCSNLSFLSTRKCGHCSN-LSF--LSTRPPFQGQCLDHQLSLQKQGFFSDLRKGQS 101
                     67789**************************************97766665554433.222..45667766666677777776666666666666 PP

           YABBY  97 sseklsenedeevprvppvirPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahf.Pk 165
                     ss++ s +++  +p++p v++PPek+ r Psaynrf+k+eiqrika+nP+i hreafsaaaknWa + P+
  XP_021667374.1 102 SSSSSSISSEPLSPKAPFVVKPPEKKHRLPSAYNRFMKDEIQRIKAANPEIPHREAFSAAAKNWARYiPN 171
                     66666778888999*9*************************************************75265 PP
Sequence ? help Back to Top
Protein Sequence    Length: 243 aa     Download sequence    
MNLEEKVSME LVPPSEHLCY VRCNFCNTVL AVGIPCKRLL DTVTVKCGHC SNLSFLSTRK  60
CGHCSNLSFL STRPPFQGQC LDHQLSLQKQ GFFSDLRKGQ SSSSSSSISS EPLSPKAPFV  120
VKPPEKKHRL PSAYNRFMKD EIQRIKAANP EIPHREAFSA AAKNWARYIP NLSAGSVSGN  180
GNSVSKKINE VKQAMQWVEI DVESRRDVDE DICIYLNWLI NSNFFQLLCF SFGVMFDGKC  240
FSY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G69180.15e-63YABBY family protein