PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021667478.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

ARR-B

Protein Properties

Length: 390aa MW: 44623.5 Da PI: 6.5129

Description

ARR-B family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021667478.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	64.9	1.4e-20	200	252	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+r++W+ +LH+rFv+av+q+ G + k+il+lm+v+ Lt+e+v+SHLQkYR+ XP_021667478.1 200 KARVVWSVDLHQRFVKAVNQI-GFD-IGQKEILDLMNVPWLTRENVASHLQKYRI 252 68*****************.787.567***********************7 PP
2	Myb_DNA-binding	32.7	1.7e-10	202	251	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmg.kgRtlkqcksrwqkyl 48 r W+ ++++++v+av+q G + k I m+ +t++++ s++qky+ XP_021667478.1 202 RVVWSVDLHQRFVKAVNQIGFDiGQKEILDLMNvPWLTRENVASHLQKYR 251 678******************99**********************7 PP
3	Response_reg	82.5	1.3e-27	20	128	1	109
EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTT CS Response_reg 1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaG 93 vl+vdD+p+ +++l+++l+k y ev++++ +++al+l++e++ +D+++ D++mp+mdG+++l++ e +lp+i+++ + ++ + ++l+ G XP_021667478.1 20 VLVVDDDPIWLKILEKMLKKCSY-EVTTCALARDALHLFRERKdgYDIVISDVNMPDMDGFKFLEHVGLEM-DLPVIMMSVDAGSSRVMKCLQHG 112 89*******************.***********999999******************6644.8****************** PP ESEEEESS--HHHHHH CS Response_reg 94 akdflsKpfdpeelvk 109 a d+l Kp+ + el++ XP_021667478.1 113 ACDYLLKPIRIIELRN 128 **********9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 390 aa Download sequence
MMDNGFSSLR NDAFPAGLRV LVVDDDPIWL KILEKMLKKC SYEVTTCALA RDALHLFRER 60 KDGYDIVISD VNMPDMDGFK FLEHVGLEMD LPVIMMSVDA GSSRVMKCLQ HGACDYLLKP 120 IRIIELRNIW KHVSRKKINE VRDIEILEGM ETIQTTRNGL DQPDYGHLVC GEDLTSVKKR 180 KDIEGKHDDK DPCDNSSTKK ARVVWSVDLH QRFVKAVNQI GFDIGQKEIL DLMNVPWLTR 240 ENVASHLQKY RIYLSRLQKQ MDLEIAFNWI NDSDSHSRSA TSVGTQYSCN MWHKGVSNGS 300 YGFSGNSSPL HYLEPRLYGR SYVSDEEGTV SKPVIASKRS LTTDDSDTWK SRRSQTEFSY 360 SSPSWESEVN SAAFDSTFLF IPSRDDEKKH

Sequence ? help Back to Top

Protein Sequence Length: 390 aa Download sequence

MMDNGFSSLR NDAFPAGLRV LVVDDDPIWL KILEKMLKKC SYEVTTCALA RDALHLFRER  60
KDGYDIVISD VNMPDMDGFK FLEHVGLEMD LPVIMMSVDA GSSRVMKCLQ HGACDYLLKP  120
IRIIELRNIW KHVSRKKINE VRDIEILEGM ETIQTTRNGL DQPDYGHLVC GEDLTSVKKR  180
KDIEGKHDDK DPCDNSSTKK ARVVWSVDLH QRFVKAVNQI GFDIGQKEIL DLMNVPWLTR  240
ENVASHLQKY RIYLSRLQKQ MDLEIAFNWI NDSDSHSRSA TSVGTQYSCN MWHKGVSNGS  300
YGFSGNSSPL HYLEPRLYGR SYVSDEEGTV SKPVIASKRS LTTDDSDTWK SRRSQTEFSY  360
SSPSWESEVN SAAFDSTFLF IPSRDDEKKH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G67710.1	1e-112	ARR-B family protein