PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021667818.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

LBD

Protein Properties

Length: 243aa MW: 26647.9 Da PI: 6.2231

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021667818.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	124.8	4.1e-39	42	143	1	101
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 +C aCk+lrrkC ++C++ap+f ++q +++fa+vhk+FGasnv+kll ++p ++r++a+ ++ yeA+ar++dPvyG+v++il+lqqq+++l+ael XP_021667818.1 42 PCGACKFLRRKCISGCIFAPHFGSDQgAARFAAVHKVFGASNVSKLLLHIPMNRRHEAVVTISYEAQARLSDPVYGCVSTILALQQQVASLQAEL 136 7*********************9989*************************************************************** PP DUF260 95 allkeel 101 a+++++l XP_021667818.1 137 AMVQSQL 143 *9985 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MADPQCDDTS DTRRKGIGKR GSSMPVESQS VAEPTPVPSV APCGACKFLR RKCISGCIFA 60 PHFGSDQGAA RFAAVHKVFG ASNVSKLLLH IPMNRRHEAV VTISYEAQAR LSDPVYGCVS 120 TILALQQQVA SLQAELAMVQ SQLINSRFAM ANFLQNPQQQ QQQHQQQQQV AMLQPAYSNN 180 SSASTNLIHM SSFTSNFDIV TDTAPSSHSL EPLQLSRPSH DEEDDEEESQ IPGIFVDEIL 240 HQR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G03760.1	1e-69	LBD family protein