PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021668273.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 475aa MW: 53236.1 Da PI: 6.8352

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021668273.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.3	5.7e-13	303	348	4	54
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+r+N++f Lr+++P+ K++Ka+ L Av YI +L XP_021668273.1 303 NHVEAERQRRKRLNHRFYALRSVVPNV-----SKMDKASLLADAVTYIEEL 348 799*********************6.....5*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 475 aa Download sequence
MEEIMPPYSP SSLLSFCQES SPSLQQRLHV ILQSCPGWWI YAIFWQVSKN ASGHLVFSWG 60 DGNFRGSKEF FTKPSNTLNQ HKSGFNLERK ASKELQALFS DDMDMDRLAD AYDSDYGWFY 120 NASATRTFAV GEGIVGQTFG SGGFTWLTGD HRLQLYRCER VKEARMHGIQ TLVCVSTSCG 180 VVELGSSHMI NEDWSLVQLC KSLFGADVAC LISKQLSHES QLQIPDRGAS FLDIGMFSCA 240 QMETFPEKQN EGDKKRDASA FGQGRSSSDS GPSDSDVNLA AGNTNGRFKK RGRKPNGKEL 300 PLNHVEAERQ RRKRLNHRFY ALRSVVPNVS KMDKASLLAD AVTYIEELKA KVDELEAKLQ 360 AVSKQSKITS TIIYDNQSTN YMVNHLRPSS SYRDKAMEVD VKIVGSEAMV RVHSPDVNYP 420 AVRLMDALRE LEFQVHHASV SSINEMVLQD VVVNVPEGLT SEEFMTSAIF QRMQN

Sequence ? help Back to Top

Protein Sequence Length: 475 aa Download sequence

MEEIMPPYSP SSLLSFCQES SPSLQQRLHV ILQSCPGWWI YAIFWQVSKN ASGHLVFSWG  60
DGNFRGSKEF FTKPSNTLNQ HKSGFNLERK ASKELQALFS DDMDMDRLAD AYDSDYGWFY  120
NASATRTFAV GEGIVGQTFG SGGFTWLTGD HRLQLYRCER VKEARMHGIQ TLVCVSTSCG  180
VVELGSSHMI NEDWSLVQLC KSLFGADVAC LISKQLSHES QLQIPDRGAS FLDIGMFSCA  240
QMETFPEKQN EGDKKRDASA FGQGRSSSDS GPSDSDVNLA AGNTNGRFKK RGRKPNGKEL  300
PLNHVEAERQ RRKRLNHRFY ALRSVVPNVS KMDKASLLAD AVTYIEELKA KVDELEAKLQ  360
AVSKQSKITS TIIYDNQSTN YMVNHLRPSS SYRDKAMEVD VKIVGSEAMV RVHSPDVNYP  420
AVRLMDALRE LEFQVHHASV SSINEMVLQD VVVNVPEGLT SEEFMTSAIF QRMQN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G00870.1	6e-65	bHLH family protein