PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021668414.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 313aa    MW: 35464.9 Da    PI: 6.225
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021668414.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding54.72.4e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg W++eEde+l+++++ +G g+W+ ++++ g+ R++k+c++rw +yl
   XP_021668414.1 14 RGLWSPEEDEKLIRYITTHGYGCWSEVPEKAGLQRCGKSCRLRWINYL 61
                     788*******************************************97 PP
2Myb_DNA-binding54.43e-1767111147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      rgr+T+eE++l+++++   G++ W+ Ia++++ gRt++++k++w+++
   XP_021668414.1  67 RGRFTPEEEKLIINLHGVVGNR-WAHIASHLP-GRTDNEIKNYWNSW 111
                      89********************.*********.************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 313 aa     Download sequence    
MGHHSCCNQQ KVKRGLWSPE EDEKLIRYIT THGYGCWSEV PEKAGLQRCG KSCRLRWINY  60
LRPDIRRGRF TPEEEKLIIN LHGVVGNRWA HIASHLPGRT DNEIKNYWNS WIKKKIRKPS  120
APPTSVAAKS SGTDHSHTNF GSNQLDLAHH DLITRPQIQE TLFSSPAPLF MFDTGTSPLD  180
GIADRSVRGE LFHEPASLNT EPWNSNQHHH HQVQALPPQA TFSIGMDTNY LPPLIENMEN  240
MLPMEMQSCS MDEEGEIPLG CLQRQELNEW VESQQCPNFL FWDNVDGPLG GEEIAPVSSS  300
MEATIFSSFP SSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G63910.11e-105MYB family protein