PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021668430.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 347aa MW: 38114.2 Da PI: 6.7707

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021668430.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	22.9	2.2e-07	124	145	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C++Cgk F+r nL+ H+r H XP_021668430.1 124 FCEICGKGFKRDANLRMHMRAH 145 6*******************99 PP
2	zf-C2H2	10.7	0.0017	212	235	1	23
EEETTTT.EEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCg.ksFsrksnLkrHirtH 23 y+C+ C+ ksFs +Lk+H++ + XP_021668430.1 212 YSCNRCNkKSFSVVADLKSHLKHC 235 99*******************977 PP
3	zf-C2H2	13.6	0.0002	243	259	5	21
TTTEEESSHHHHHHHHH CS zf-C2H2 5 dCgksFsrksnLkrHir 21 Cg++Fsrk+ L H+ XP_021668430.1 243 SCGTTFSRKDKLFAHMA 259 5***************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MDSLQQFLSE SVNNNTLISK AQMDMVSAEI SSAIHQIIVN GAALLAGSQP VIELPVAAKP 60 PEILPDPPDL KFATKTSNSS DSYSNKGNQV ANFSLKVEER DDFDVDCDIV ELDAVELLAE 120 HVHFCEICGK GFKRDANLRM HMRAHGNQFK TPEALAKPDK GSESSAAAKR KTRFSCPFEG 180 CNRNKKHKKF RPLKSVICVR NHFKRSHCPK MYSCNRCNKK SFSVVADLKS HLKHCGETRW 240 KCSCGTTFSR KDKLFAHMAL FEDHMPAVVG EDDNRAKGGV VAMGEDEEGE VPVKEGELLG 300 NCADNGFIEG LLDGFASIEG YNLEDVLGSP RNGWGSGMED LCGIGRS

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MDSLQQFLSE SVNNNTLISK AQMDMVSAEI SSAIHQIIVN GAALLAGSQP VIELPVAAKP  60
PEILPDPPDL KFATKTSNSS DSYSNKGNQV ANFSLKVEER DDFDVDCDIV ELDAVELLAE  120
HVHFCEICGK GFKRDANLRM HMRAHGNQFK TPEALAKPDK GSESSAAAKR KTRFSCPFEG  180
CNRNKKHKKF RPLKSVICVR NHFKRSHCPK MYSCNRCNKK SFSVVADLKS HLKHCGETRW  240
KCSCGTTFSR KDKLFAHMAL FEDHMPAVVG EDDNRAKGGV VAMGEDEEGE VPVKEGELLG  300
NCADNGFIEG LLDGFASIEG YNLEDVLGSP RNGWGSGMED LCGIGRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.2	9e-80	C2H2 family protein