PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021668442.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 380aa MW: 41659.3 Da PI: 6.5009

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021668442.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	22.8	2.4e-07	160	181	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 C++Cgk F+r nL+ H+r H XP_021668442.1 160 FCEICGKGFKRDANLRMHMRAH 181 6*******************99 PP
2	zf-C2H2	11.3	0.0011	279	295	5	21
TTTEEESSHHHHHHHHH CS zf-C2H2 5 dCgksFsrksnLkrHir 21 Cg++Fsrk+ L H+ XP_021668442.1 279 SCGTTFSRKDKLFGHMA 295 5**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 380 aa Download sequence
MSNPAESSAV PMGYSVPVCS ADPRVPLQNL SAVRVRMDSL QQFLSDSVYN NNLISKDQME 60 MISVEISSAI HQIIVNGAAL LACSQPVVEP PTGARLVEKL SDPPDLKIAT KLPNSLEGNS 120 EKGNQAAVFS LKVEERDDLD VDCDIVELDA VELLAEHVHF CEICGKGFKR DANLRMHMRA 180 HGNQFKTPEA LAKPDKGNES SAAATRKTRF SCPFDGCNRN KKHKKFRPLK SVICVRNHFK 240 RSHCPKMYSC NRCNKKSFSV VADLKSHLKH CGESRWKCSC GTTFSRKDKL FGHMALFEGH 300 MPAVVGEEDD RAKGGVAAME GDEEVLEEGE LLGNCTDNGF FEGLLDGFAS IEGYNLEDVL 360 GSTRNGWGSG MEDLCGIGRS

Sequence ? help Back to Top

Protein Sequence Length: 380 aa Download sequence

MSNPAESSAV PMGYSVPVCS ADPRVPLQNL SAVRVRMDSL QQFLSDSVYN NNLISKDQME  60
MISVEISSAI HQIIVNGAAL LACSQPVVEP PTGARLVEKL SDPPDLKIAT KLPNSLEGNS  120
EKGNQAAVFS LKVEERDDLD VDCDIVELDA VELLAEHVHF CEICGKGFKR DANLRMHMRA  180
HGNQFKTPEA LAKPDKGNES SAAATRKTRF SCPFDGCNRN KKHKKFRPLK SVICVRNHFK  240
RSHCPKMYSC NRCNKKSFSV VADLKSHLKH CGESRWKCSC GTTFSRKDKL FGHMALFEGH  300
MPAVVGEEDD RAKGGVAAME GDEEVLEEGE LLGNCTDNGF FEGLLDGFAS IEGYNLEDVL  360
GSTRNGWGSG MEDLCGIGRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G34370.2	1e-81	C2H2 family protein