PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021668468.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 568aa MW: 64711.1 Da PI: 8.0057

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021668468.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.5	5e-13	388	432	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h + ErrRR++iN++fe Lr++lP+ K +Ka++L+++ eY+ sL XP_021668468.1 388 HMISERRRREKINESFEALRKILPTE-----AKKDKASVLTRTREYLTSL 432 8899*******************6.....599***********998 PP

Sequence ? help Back to Top
Protein Sequence Length: 568 aa Download sequence
MDTVFSPLIS DGDRATYLRS LMQSFGCNYI CLWRYFPQPN HLHFMDGYYH EEASQPGSSS 60 GSLARRLFDE YRRKEFFVVN DRVPGMAFIN NQPYRELNES ELQRMASVAV QQRFYQEARI 120 KTAVFMGCRS GEIEMGWSNG MTQINMENAM RSLFPEDIPH QQSPLRELSQ AVDPNRPSSS 180 SSSLRSLSMD SPDSSPFLFN IPTSQISEIP QETPLLQPIQ STSSAIQQVL QSLQRVQSTT 240 SPLQLAMQSL QPVPSTTSPL QPATQSFQPI PSTTSPHQAA MQAFALTRNI QLPSRESEDA 300 AMTRAILAVL TSPSSSTSSS ITPNLPYHYR ESQRTSAFKN YLTPTRLMSQ SLRKQSMLKR 360 AITYYRSLNT VRREHMLASR PTSTQLHHMI SERRRREKIN ESFEALRKIL PTEAKKDKAS 420 VLTRTREYLT SLKAQVEELS KRNQQLEAQV LQQLPAKEVA QEESETSSTE RVELRLAHVS 480 ESTSEEQRII DLQVVLRGEC PIQDMVIRIL EFLNQVNNVN VMSVEANTRT TESRSMNRVI 540 LRLKIEGEEW DESAFQEAVR RVVADLAQ

Sequence ? help Back to Top

Protein Sequence Length: 568 aa Download sequence

MDTVFSPLIS DGDRATYLRS LMQSFGCNYI CLWRYFPQPN HLHFMDGYYH EEASQPGSSS  60
GSLARRLFDE YRRKEFFVVN DRVPGMAFIN NQPYRELNES ELQRMASVAV QQRFYQEARI  120
KTAVFMGCRS GEIEMGWSNG MTQINMENAM RSLFPEDIPH QQSPLRELSQ AVDPNRPSSS  180
SSSLRSLSMD SPDSSPFLFN IPTSQISEIP QETPLLQPIQ STSSAIQQVL QSLQRVQSTT  240
SPLQLAMQSL QPVPSTTSPL QPATQSFQPI PSTTSPHQAA MQAFALTRNI QLPSRESEDA  300
AMTRAILAVL TSPSSSTSSS ITPNLPYHYR ESQRTSAFKN YLTPTRLMSQ SLRKQSMLKR  360
AITYYRSLNT VRREHMLASR PTSTQLHHMI SERRRREKIN ESFEALRKIL PTEAKKDKAS  420
VLTRTREYLT SLKAQVEELS KRNQQLEAQV LQQLPAKEVA QEESETSSTE RVELRLAHVS  480
ESTSEEQRII DLQVVLRGEC PIQDMVIRIL EFLNQVNNVN VMSVEANTRT TESRSMNRVI  540
LRLKIEGEEW DESAFQEAVR RVVADLAQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	392	397	ERRRRE
2	393	398	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56960.1	2e-59	bHLH family protein