PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021668469.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 564aa MW: 64200.5 Da PI: 7.6576

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021668469.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	40.5	4.9e-13	384	428	5	54
HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 h + ErrRR++iN++fe Lr++lP+ K +Ka++L+++ eY+ sL XP_021668469.1 384 HMISERRRREKINESFEALRKILPTE-----AKKDKASVLTRTREYLTSL 428 8899*******************6.....599***********998 PP

Sequence ? help Back to Top
Protein Sequence Length: 564 aa Download sequence
MDTVFSPLIS DGDRATYLRS LMQSFGCNYI CLWRYFPQPN HSLHFMDGYY HEEASQPGSS 60 SGSLARRLFD EYRRKEFFVV NDRVPGMAFI NNQPYRELNE SELQRMASVA VQQRFYQTAV 120 FMGCRSGEIE MGWSNGMTQI NMENAMRSLF PEDIPHQQSP LRELSQAVDP NRPSSSSSSL 180 RSLSMDSPDS SPFLFNIPTS QISEIPQETP LLQPIQSTSS AIQQVLQSLQ RVQSTTSPLQ 240 LAMQSLQPVP STTSPLQPAT QSFQPIPSTT SPHQAAMQAF ALTRNIQLPS RESEDAAMTR 300 AILAVLTSPS SSTSSSITPN LPYHYRESQR TSAFKNYLTP TRLMSQSLRK QSMLKRAITY 360 YRSLNTVRRE HMLASRPTST QLHHMISERR RREKINESFE ALRKILPTEA KKDKASVLTR 420 TREYLTSLKA QVEELSKRNQ QLEAQVLQQL PAKEVAQEES ETSSTERVEL RLAHVSESTS 480 EEQRIIDLQV VLRGECPIQD MVIRILEFLN QVNNVNVMSV EANTRTTESR SMNRVILRLK 540 IEGEEWDESA FQEAVRRVVA DLAQ

Sequence ? help Back to Top

Protein Sequence Length: 564 aa Download sequence

MDTVFSPLIS DGDRATYLRS LMQSFGCNYI CLWRYFPQPN HSLHFMDGYY HEEASQPGSS  60
SGSLARRLFD EYRRKEFFVV NDRVPGMAFI NNQPYRELNE SELQRMASVA VQQRFYQTAV  120
FMGCRSGEIE MGWSNGMTQI NMENAMRSLF PEDIPHQQSP LRELSQAVDP NRPSSSSSSL  180
RSLSMDSPDS SPFLFNIPTS QISEIPQETP LLQPIQSTSS AIQQVLQSLQ RVQSTTSPLQ  240
LAMQSLQPVP STTSPLQPAT QSFQPIPSTT SPHQAAMQAF ALTRNIQLPS RESEDAAMTR  300
AILAVLTSPS SSTSSSITPN LPYHYRESQR TSAFKNYLTP TRLMSQSLRK QSMLKRAITY  360
YRSLNTVRRE HMLASRPTST QLHHMISERR RREKINESFE ALRKILPTEA KKDKASVLTR  420
TREYLTSLKA QVEELSKRNQ QLEAQVLQQL PAKEVAQEES ETSSTERVEL RLAHVSESTS  480
EEQRIIDLQV VLRGECPIQD MVIRILEFLN QVNNVNVMSV EANTRTTESR SMNRVILRLK  540
IEGEEWDESA FQEAVRRVVA DLAQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	388	393	ERRRRE
2	389	394	RRRREK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56960.1	1e-59	bHLH family protein