PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021668578.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

LBD

Protein Properties

Length: 248aa MW: 25589.8 Da PI: 8.0101

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021668578.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	129.7	1.3e-40	32	132	1	100
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkael 94 +C aCk+lrrkC+++C++apyf +eq +++fa+vhk+FGasnv+kll ++p ++r da+ +++yeA+ar+rdPvyG+v++i++lqqq+ +l+ael XP_021668578.1 32 PCGACKFLRRKCVPGCIFAPYFDSEQgAAHFAAVHKVFGASNVSKLLLHIPVHKRLDAVVTVCYEAQARLRDPVYGCVSHIFALQQQVVNLQAEL 126 7*********************9989***************************************************************** PP DUF260 95 allkee 100 ++l+++ XP_021668578.1 127 SYLQTH 132 *99976 PP

Sequence ? help Back to Top
Protein Sequence Length: 248 aa Download sequence
MSATVNPSSS GGSGSSCGGG GGSSSSSGGS GPCGACKFLR RKCVPGCIFA PYFDSEQGAA 60 HFAAVHKVFG ASNVSKLLLH IPVHKRLDAV VTVCYEAQAR LRDPVYGCVS HIFALQQQVV 120 NLQAELSYLQ THLATLELPS PPAPPPPPAT LVTSPPLSIA DLPSASSVPT TYDLSSLFDP 180 MTQPSWAMQQ RQMDPRQFGG STGSSSATSG GGDLQSLARE LLHRNGSPPQ GSMSCTGSLS 240 SPSISKRD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45420.1	9e-79	LBD family protein