PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021668653.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family BBR-BPC
Protein Properties Length: 265aa    MW: 29289.8 Da    PI: 10.6538
Description BBR-BPC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021668653.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GAGA_bind2449.9e-7567265102301
       GAGA_bind 102 lsgtksidslqqlse....pqledsavelreeeklealpieeaaeeakekkkkkkrqrakkpkekkakkkkkksekskkkvkkesaderskaekk 192
                      ++t+si+s  ++ +      +++ +  ++++e  ++++  +++ +a+++k + k++++ + k+ k k++kk+s+k++ + ++    +++ +ek+
  XP_021668653.1  67 APKTSSIHSQGTQIDsqpgLPVAPICSVAPKTEPAKNNNSGTKPAKARKQKPSLKGSNQISSKTLKPKQPKKTSSKKNGH-SM----PEAIREKR 156
                     45555555544433323334456666667778888888877888888888888888888888888888888844443322.22....34567999 PP

       GAGA_bind 193 sidlvlngvslDestlPvPvCsCtGalrqCYkWGnGGWqSaCCtttiSvyPLPvstkrrgaRiagrKmSqgafkklLekLaaeGydlsnpvDLkd 287
                     ++++ ++ +++D s++P P CsCtG++r+CYkWG+GGWqS+CCt++iS yPLP+s++r+gaR+agrKmS+ga+ klL kLaaeG+dls+pvDLk+
  XP_021668653.1 157 NLNVDIDRMNYDLSGVPSPFCSCTGMPRVCYKWGAGGWQSSCCTISISEYPLPMSSTRPGARMAGRKMSNGAYVKLLLKLAAEGHDLSHPVDLKE 251
                     *********************************************************************************************** PP

       GAGA_bind 288 hWAkHGtnkfvtir 301
                     hWA+HGtnkfv i+
  XP_021668653.1 252 HWARHGTNKFVIIK 265
                     ***********998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 265 aa     Download sequence    
MRFLVCKSVR NLIFYKQCSN VRAVLIHLAV KYMMGTYSNR SHITPETSTG ASVPHFSWFY  60
SRSFYSAPKT SSIHSQGTQI DSQPGLPVAP ICSVAPKTEP AKNNNSGTKP AKARKQKPSL  120
KGSNQISSKT LKPKQPKKTS SKKNGHSMPE AIREKRNLNV DIDRMNYDLS GVPSPFCSCT  180
GMPRVCYKWG AGGWQSSCCT ISISEYPLPM SSTRPGARMA GRKMSNGAYV KLLLKLAAEG  240
HDLSHPVDLK EHWARHGTNK FVIIK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35550.14e-69BBR-BPC family protein