PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021668728.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 570aa    MW: 64928.8 Da    PI: 4.7465
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021668728.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS287.92.8e-881775472374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal..ppsetsekn.sseelaalklfsevsPilkf 93 
                      e Ll+ Ae   +++  +a++lL      +s++g+p+qR++ yf eAL++r+ r+++++ ++   ++++ + ++ ++   +a k+ +e  P+++ 
  XP_021668728.1 177 AEILLASAEKAGNKEYDRASRLLDFCDRFSSNTGNPVQRIVYYFSEALHKRIDRETQKIISKGcgKSKSLAIDQlVIIPNSAIKACHEGVPFYQA 271
                     5789999999999*****************************************7777776653433333333357777789999********** PP

            GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp.slRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrle 187
                     +hl   qaIle v++++r+HiiD+ i +GlQW  L+qaL sR + p   l+iT+v+    +sk+ +e+tg+rL +fA+++++pf+f++++++++e
  XP_021668728.1 272 AHLSGSQAILENVAEAKRIHIIDLKIRNGLQWTVLMQALVSRCNCPLeLLKITAVET---SSKQLIENTGNRLMSFAQAMNIPFSFKIVMVSSME 363
                     ******************************************97665499*******...58999****************************** PP

            GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseer 282
                     dl+ + + ++++E++aV + +++++l      l+++  +v+++++s++P ++vv+e+ea+hns+ F++rf+eal ++sa fd+++a++++++ +r
  XP_021668728.1 364 DLKEDLFGIETEEVVAVYSEYAIMNLI----VLRDQLYSVMRVIRSIKPCIMVVIESEANHNSPVFVNRFVEALFFFSAYFDCVDASMGKDDPNR 454
                     **************************9....55555677******************************************************** PP

            GRAS 283 ikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     + +E  +lg+ i+n+va+eg++r  r+ +   Wr  + ++ + + +lse+   qa+l +++++ ++  +   + +sl+ gWk+ p++s+S W+
  XP_021668728.1 455 MIMESLFLGEGIRNIVATEGEDRDIRNVKIDVWRTFFAQFEMVETELSESCLHQANLAVKNFPcGKYCTTSMDGKSLIVGWKGTPILSLSTWK 547
                     ***************************************************************777667778889999**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 570 aa     Download sequence    
MERRKNEEGV KDNYGLYHRE SLVEGCLFSD YQQQEQEQES YSDYRLFCYD DPRFSIISPP  60
LQLPPWPDHA GEIQNGIQDD VDEPQKKNEH QFSLASLELL KKYGRGFRRL NTQRITEPSN  120
GTLSAQELST EEIVRIAAER FIESRNTRTD VASMLDNLFD LSIAGISREE AENVELAEIL  180
LASAEKAGNK EYDRASRLLD FCDRFSSNTG NPVQRIVYYF SEALHKRIDR ETQKIISKGC  240
GKSKSLAIDQ LVIIPNSAIK ACHEGVPFYQ AAHLSGSQAI LENVAEAKRI HIIDLKIRNG  300
LQWTVLMQAL VSRCNCPLEL LKITAVETSS KQLIENTGNR LMSFAQAMNI PFSFKIVMVS  360
SMEDLKEDLF GIETEEVVAV YSEYAIMNLI VLRDQLYSVM RVIRSIKPCI MVVIESEANH  420
NSPVFVNRFV EALFFFSAYF DCVDASMGKD DPNRMIMESL FLGEGIRNIV ATEGEDRDIR  480
NVKIDVWRTF FAQFEMVETE LSESCLHQAN LAVKNFPCGK YCTTSMDGKS LIVGWKGTPI  540
LSLSTWKFIS QKEEEACHEQ EGFEEQILNC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G66350.16e-54GRAS family protein