PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021668730.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 570aa    MW: 64849.7 Da    PI: 4.6197
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021668730.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS293.36.5e-901775472374
            GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykal..ppsetsekn.sseelaalklfsevsPilkf 93 
                      e Ll+ Ae   +++  +a++lL     l+s++g+p+qR++ yf eAL++r+ r+++++ ++   ++++ + ++ ++   +a k+ +e  P+++ 
  XP_021668730.1 177 AEILLASAEKAGNKEYDRASRLLDFCDRLSSNTGNPVQRIVYYFSEALHERIDRETQKIISKGcgKSKSLAIDQlVIIPNSAIKACHEGVPFYQA 271
                     5789999999999*****************************************7777776653433333333357777789999********** PP

            GRAS  94 shltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrle 187
                     +hlt  qaIle v++++r+HiiD+ i +GlQW  L+qaLasR   +   l+iT+v+    +sk+ +e+tg+rL +fA+++++pf+f++++++++e
  XP_021668730.1 272 AHLTGSQAILENVAEAKRIHIIDLKIRNGLQWTVLMQALASRCdCPLELLKITAVET---SSKQLIENTGNRLMSFAQAMNIPFSFKIVMVSSME 363
                     ******************************************9445569********...58999****************************** PP

            GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseer 282
                     dl+ + + ++++E++aV + +++++l      l+++  +v+++++s++P ++vv+e+ea+hns+ F++rf+eal ++sa fd+++a++++++ +r
  XP_021668730.1 364 DLKEDLFGIETEEVVAVYSEYAIMNLI----VLRDQLYSVMRVIRSIKPCIMVVIESEANHNSPVFVNRFVEALFFFSAYFDCVDASMGKDDPNR 454
                     **************************9....55555677******************************************************** PP

            GRAS 283 ikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     + +E  +lg+ i+n+va+eg++r  r+ +   Wr  + ++ + + +lse+   qa+l +++++ ++  +   + +sl+ gWk+ p++s+S W+
  XP_021668730.1 455 MIMESLFLGEGIRNIVATEGEDRDIRNVKIDVWRTFFAQFEMVETELSESCLHQANLAVKNFPcGKYCTTSMDGKSLIVGWKGTPILSLSTWK 547
                     ***************************************************************777667778889999**************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 570 aa     Download sequence    
MERRKNEEGV KDNYGLYHRE SLVEGCLFSD YQQQEQEQES YSDYRLFCYD DPRFSIISPP  60
LQLPPWPDHA GEIQNGIQDD VDEPQKKNEH QFSLASLELL KKYGRGFRRL NTQGITEPSN  120
GTLSAQELST EEIVRIAAER FIQFRNTRTD VASMLDNLFD LSIAGISREE AENVELAEIL  180
LASAEKAGNK EYDRASRLLD FCDRLSSNTG NPVQRIVYYF SEALHERIDR ETQKIISKGC  240
GKSKSLAIDQ LVIIPNSAIK ACHEGVPFYQ AAHLTGSQAI LENVAEAKRI HIIDLKIRNG  300
LQWTVLMQAL ASRCDCPLEL LKITAVETSS KQLIENTGNR LMSFAQAMNI PFSFKIVMVS  360
SMEDLKEDLF GIETEEVVAV YSEYAIMNLI VLRDQLYSVM RVIRSIKPCI MVVIESEANH  420
NSPVFVNRFV EALFFFSAYF DCVDASMGKD DPNRMIMESL FLGEGIRNIV ATEGEDRDIR  480
NVKIDVWRTF FAQFEMVETE LSESCLHQAN LAVKNFPCGK YCTTSMDGKS LIVGWKGTPI  540
LSLSTWKFIC QKEEEACQEQ EGFEEQILNC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.17e-55GRAS family protein