PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021668737.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MIKC_MADS
Protein Properties Length: 196aa    MW: 22739.3 Da    PI: 10.5335
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021668737.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF86.61.4e-27959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krien + r+vtfskRrngilKKA+ELS+LCdaev++++fs tgk y ++s
  XP_021668737.1  9 KRIENPTSRHVTFSKRRNGILKKAFELSILCDAEVCLLVFSATGKAYQFAS 59
                    79**********************************************986 PP
2K-box76.19.5e-26841711299
           K-box  12 akaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 
                     +++e +++e++ L++ i ++++ ++hl Ged+++L +keL+qLe+qL++++++iRskK ++++e+i+ l++k ++lqe n++L+k+++
  XP_021668737.1  84 RTMEFWRNEIEELERTIATMETGLKHLCGEDISTLGMKELKQLERQLKTGVERIRSKKRRIITEHINLLKRKHRALQEGNTRLQKRIK 171
                     56899*******************************************************************************9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 196 aa     Download sequence    
MGRGKVDLKR IENPTSRHVT FSKRRNGILK KAFELSILCD AEVCLLVFSA TGKAYQFASH  60
DTDRTIARYR REVGLLGSND QYCRTMEFWR NEIEELERTI ATMETGLKHL CGEDISTLGM  120
KELKQLERQL KTGVERIRSK KRRIITEHIN LLKRKHRALQ EGNTRLQKRI KLQELRDASI  180
GTGILDPNPC NAFQQR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45650.13e-45MIKC_MADS family protein