PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021669003.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HD-ZIP

Protein Properties

Length: 273aa MW: 30809.5 Da PI: 4.5613

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021669003.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	65.3	8.7e-21	67	120	3	56
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 k++++t+eq++ Le+ Fe ++++ e++++LAkklgL+ rqV vWFqNrRa++k XP_021669003.1 67 KKRRLTPEQVNLLEKSFEAENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWK 120 5678*************************************************9 PP
2	HD-ZIP_I/II	130.7	5.6e-42	66	157	1	92
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelk 92 ekkrrl+ eqv+lLE+sFe+e+kLeperK++la++LglqprqvavWFqnrRAR+ktkqlE+dy+ Lk++yd+l + +++ ke+e+L++e+ XP_021669003.1 66 EKKRRLTPEQVNLLEKSFEAENKLEPERKTQLAKKLGLQPRQVAVWFQNRRARWKTKQLERDYDLLKASYDSLLSIYDTVIKENEKLKSEVV 157 69**************************************************************************************9986 PP

Sequence ? help Back to Top
Protein Sequence Length: 273 aa Download sequence
MESGRLFFNP SSCNGNMLFL ENRDPVFRGP RLSMLNMEVD TSKKRPFFSS PEDLFDDEYY 60 EEQLPEKKRR LTPEQVNLLE KSFEAENKLE PERKTQLAKK LGLQPRQVAV WFQNRRARWK 120 TKQLERDYDL LKASYDSLLS IYDTVIKENE KLKSEVVSLT VKLETKDVTE APVPGQKSDS 180 VPVDTANACG VQMGVKVEDH LSSGSAGSAV VDEHSPQLLD SGDSFFQNDN YGGCVIGGPV 240 DGVQSVEDDG SEVCRSYFSD VFLTTGGQLW MWP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	115	123	RRARWKTKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G01470.1	3e-93	HD-ZIP family protein