PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021669157.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

FAR1

Protein Properties

Length: 818aa MW: 94368.3 Da PI: 6.3713

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021669157.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	75.1	1.5e-23	140	226	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +Y++YA GFs+rk+ +ks+ ng +++r+++C+++g+r +++ + + r++r etrtgC a++++ ++ +gk++vt++e++HnHe++ XP_021669157.1 140 CYSRYAVLEGFSIRKDFVNKSRINGDVVSRRYTCYRQGYRPPKHIA--NVRKPRHETRTGCLAHMTIARQPNGKFRVTRFETQHNHEFV 226 7***************************************9988..99***********************************97 PP
2	FAR1	91.3	1.3e-28	274	362	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 +fYn+YA +vGFsvrk++ ++sk +g + +r+f+C +eg+r++++++ + +r+r+etr+gC a+l++++++dgk++vt++e++HnHel+ XP_021669157.1 274 EFYNAYAGRVGFSVRKDYVNRSKIDGAVASRRFTCFREGFRQKDNRD-LNVKRPRKETRIGCMAQLVISRQSDGKYRVTHFEEQHNHELV 362 6*****************************************999.9999**********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 818 aa Download sequence
MDGHEPDTSS YVQKEVVENE IQASPAVETD VEQEHPGSEA SSVEKSLGFI QSEHDCQTRE 60 AGSSNDRSRV EVDGEDCDSP KSSSVNQSET HFEDDLESQS PNVSLVDVSG SSDAVKEEEE 120 GYVVPKVGME FETEDHAYKC YSRYAVLEGF SIRKDFVNKS RINGDVVSRR YTCYRQGYRP 180 PKHIANVRKP RHETRTGCLA HMTIARQPNG KFRVTRFETQ HNHEFVTPST AHMLPSQKRL 240 TFAQAVEADL AKGSGMDGVP KLGMGFDSED HAYEFYNAYA GRVGFSVRKD YVNRSKIDGA 300 VASRRFTCFR EGFRQKDNRD LNVKRPRKET RIGCMAQLVI SRQSDGKYRV THFEEQHNHE 360 LVAACRVRTL RSQKRLATAQ FEGNGVDGST TQPKLVSELL CNRVGDQDAH GYQPINSNSK 420 LPFKQMRDMK EGEAERLQQY FQSKQLKNPS FFYSMQLDAD DQITNIFWAD AKMLMDYNDF 480 GDVVCFDTTC RLYKDCRPFV AFIGVNHHKQ MMVFSAAFLY DETIESYKWL FRTFIEAMSG 540 KKPKTILTDQ DAVLAEAIDS VFPDIHHRIC VWHVYQHALK QLNHMFVGSG SFINDLSSCF 600 FEHEEDEPFI NAWNGMLDAY GLWENEWLHQ MFKEREKWAI AYGRHIFCAD IRSVQLCEGF 660 TASLRKYLKF DFDVLSFFKH LGKILNDWHY KELEANYDMS QLLAILMGDV ILLKQARDIY 720 TPKIFELLQQ EYETSLNIVI NRCTENGSMF EYKVSIYGQQ KEYTVSFNSS EEIVACECKK 780 FEFMGVLCSH ALKVLDFRNI KMLPSQYILK RWTRDARI

Sequence ? help Back to Top

Protein Sequence Length: 818 aa Download sequence

MDGHEPDTSS YVQKEVVENE IQASPAVETD VEQEHPGSEA SSVEKSLGFI QSEHDCQTRE  60
AGSSNDRSRV EVDGEDCDSP KSSSVNQSET HFEDDLESQS PNVSLVDVSG SSDAVKEEEE  120
GYVVPKVGME FETEDHAYKC YSRYAVLEGF SIRKDFVNKS RINGDVVSRR YTCYRQGYRP  180
PKHIANVRKP RHETRTGCLA HMTIARQPNG KFRVTRFETQ HNHEFVTPST AHMLPSQKRL  240
TFAQAVEADL AKGSGMDGVP KLGMGFDSED HAYEFYNAYA GRVGFSVRKD YVNRSKIDGA  300
VASRRFTCFR EGFRQKDNRD LNVKRPRKET RIGCMAQLVI SRQSDGKYRV THFEEQHNHE  360
LVAACRVRTL RSQKRLATAQ FEGNGVDGST TQPKLVSELL CNRVGDQDAH GYQPINSNSK  420
LPFKQMRDMK EGEAERLQQY FQSKQLKNPS FFYSMQLDAD DQITNIFWAD AKMLMDYNDF  480
GDVVCFDTTC RLYKDCRPFV AFIGVNHHKQ MMVFSAAFLY DETIESYKWL FRTFIEAMSG  540
KKPKTILTDQ DAVLAEAIDS VFPDIHHRIC VWHVYQHALK QLNHMFVGSG SFINDLSSCF  600
FEHEEDEPFI NAWNGMLDAY GLWENEWLHQ MFKEREKWAI AYGRHIFCAD IRSVQLCEGF  660
TASLRKYLKF DFDVLSFFKH LGKILNDWHY KELEANYDMS QLLAILMGDV ILLKQARDIY  720
TPKIFELLQQ EYETSLNIVI NRCTENGSMF EYKVSIYGQQ KEYTVSFNSS EEIVACECKK  780
FEFMGVLCSH ALKVLDFRNI KMLPSQYILK RWTRDARI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-123	FAR1 family protein