PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021669236.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 251aa    MW: 28796.3 Da    PI: 8.0633
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021669236.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding45.91.3e-141461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+W++eEd++l  +v ++G  +W++ +   g+ R++k+c++rw++yl
   XP_021669236.1 14 KGAWSQEEDDKLRAYVLRYGHWNWRALPTFAGLARCGKSCRLRWLNYL 61
                     79******************99************************97 PP
2Myb_DNA-binding52.21.4e-1668112248
                      SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      g+ T+ Ed l+++++kq+G++ W++Ia++++ gR+++++k++w+++l
   XP_021669236.1  68 GNYTKKEDGLIIKLHKQFGNK-WSRIAAELP-GRSDNDIKNHWHTHL 112
                      789******************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    
MVRAPYFDKN GLKKGAWSQE EDDKLRAYVL RYGHWNWRAL PTFAGLARCG KSCRLRWLNY  60
LRPDVKHGNY TKKEDGLIIK LHKQFGNKWS RIAAELPGRS DNDIKNHWHT HLKKRTEKGQ  120
SSSRLKETFQ YEVISQNGDL KVESFVPNTP SYPILENSPL SPELSSSLTS GSILVIVSNT  180
STSSNWIAED SLSSFGTFEN TSGDFWTQPF IADQDGCKLP TPERELVSPY FSYYDDNIDL  240
FYQLMQELPG N
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G23250.12e-54MYB family protein