PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021669630.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 546aa MW: 60620.8 Da PI: 8.1412

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021669630.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	11.6	0.00084	97	116	2	21
EETTTTEEESSHHHHHHHHH CS zf-C2H2 2 kCpdCgksFsrksnLkrHir 21 +C+ Cgk+F ++ L H++ XP_021669630.1 97 PCKECGKVFQSWKALFGHLK 116 5*****************87 PP
2	zf-C2H2	11.6	0.00084	460	482	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++Cp+C k+F++ L H r+H XP_021669630.1 460 HECPICLKVFPSGQALGGHKRSH 482 79******************999 PP

Sequence ? help Back to Top
Protein Sequence Length: 546 aa Download sequence
MEEDQELRHV CKFCSKSFSC GRSLGGHMRS HMINDISAQA DGTKLTKKKL PSLPNDSGAN 60 NNTTCTETIG YGLRENPKKT WRLADHSSED TSLLDKPCKE CGKVFQSWKA LFGHLKCHTL 120 EKEKVSNDNS QEEQQDSWTS ANNQKLLMDS QSDNETVAPN RRKRSKRRIR YMGAENSSSL 180 SFANNTSSSV SEIEQEQEEV AMCLMMLSRD VGRWGGLNSV AESSDNNSVF LETSLVSSKT 240 EGKPSVCIGT KTVKVKTLGK KLENGKFEDD EDFKVENRNS EFFASGNSRK GFGKSDKAKK 300 SELDDERGPE NSRVKLGKNL TRETNLDQAG MVPKYSSSKR KLSDTFDPEL KSDYLKKITT 360 NASDSEVCKN SDRNSRFECT TCNKVFHSYQ ALGGHRASRK KTKGCFASRI DSIETELPPD 420 LTADSKLIKS IKNEISTDHL AIDCDNKAET SYGAKKSNGH ECPICLKVFP SGQALGGHKR 480 SHLVGVTETK KNQINAIQEP IPPIRDLLDL NLPAPVEEEG NGLMGFNPWW IGSSHKHEPL 540 VGLISN

Sequence ? help Back to Top

Protein Sequence Length: 546 aa Download sequence

MEEDQELRHV CKFCSKSFSC GRSLGGHMRS HMINDISAQA DGTKLTKKKL PSLPNDSGAN  60
NNTTCTETIG YGLRENPKKT WRLADHSSED TSLLDKPCKE CGKVFQSWKA LFGHLKCHTL  120
EKEKVSNDNS QEEQQDSWTS ANNQKLLMDS QSDNETVAPN RRKRSKRRIR YMGAENSSSL  180
SFANNTSSSV SEIEQEQEEV AMCLMMLSRD VGRWGGLNSV AESSDNNSVF LETSLVSSKT  240
EGKPSVCIGT KTVKVKTLGK KLENGKFEDD EDFKVENRNS EFFASGNSRK GFGKSDKAKK  300
SELDDERGPE NSRVKLGKNL TRETNLDQAG MVPKYSSSKR KLSDTFDPEL KSDYLKKITT  360
NASDSEVCKN SDRNSRFECT TCNKVFHSYQ ALGGHRASRK KTKGCFASRI DSIETELPPD  420
LTADSKLIKS IKNEISTDHL AIDCDNKAET SYGAKKSNGH ECPICLKVFP SGQALGGHKR  480
SHLVGVTETK KNQINAIQEP IPPIRDLLDL NLPAPVEEEG NGLMGFNPWW IGSSHKHEPL  540
VGLISN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45120.1	4e-30	C2H2 family protein