PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021669713.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 443aa MW: 48901.5 Da PI: 4.9627

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021669713.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	55.3	1.5e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT++Ed++l+ +++++Ggg W+t +++ g+ R++k+c++rw +yl XP_021669713.1 14 RGAWTADEDQKLIAYIQEHGGGGWRTMPQKAGLQRCGKSCRLRWANYL 61 89********************************************97 PP
2	Myb_DNA-binding	56.9	4.9e-18	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg ++teE++ ++++++ lG++ W++Iar+++ +Rt++++k++w+++l XP_021669713.1 67 RGEFSTEEEKMIIQLHATLGNR-WSAIARHLP-KRTDNEIKNYWNTHL 112 899*****************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 443 aa Download sequence
MGRTPCCNEA GLKRGAWTAD EDQKLIAYIQ EHGGGGWRTM PQKAGLQRCG KSCRLRWANY 60 LRPDIKRGEF STEEEKMIIQ LHATLGNRWS AIARHLPKRT DNEIKNYWNT HLKKRLVDRG 120 IDPVTHRLIT SSSMDNPCNM VEERSDSEIR PIQRSISTSA KLINQVSAKF AQMQRKEMTT 180 TVSTPPTCLD AIKAVLLNST KDTITYSGSS GGGGGDNGDD SDVEMIPSRP ISRSSRILNK 240 MATKLAPSKS LDLLKNRLSV PSKQSMASRS VSDTSTTGGT YNNIESPISI SDLLESMPTS 300 SSACESSELT GNLSMGEDQV NEAFAVLHQA MELETTATPE SPMYTTNELE ELLGNYGGDQ 360 DGATITNDVT KSKACDSQVA TSMEPATDFI EKFTNMPFGC RPNEYSTTKD NFYGEEESNG 420 GALEVNMNYW NEDFDWLITD CNN

Sequence ? help Back to Top

Protein Sequence Length: 443 aa Download sequence

MGRTPCCNEA GLKRGAWTAD EDQKLIAYIQ EHGGGGWRTM PQKAGLQRCG KSCRLRWANY  60
LRPDIKRGEF STEEEKMIIQ LHATLGNRWS AIARHLPKRT DNEIKNYWNT HLKKRLVDRG  120
IDPVTHRLIT SSSMDNPCNM VEERSDSEIR PIQRSISTSA KLINQVSAKF AQMQRKEMTT  180
TVSTPPTCLD AIKAVLLNST KDTITYSGSS GGGGGDNGDD SDVEMIPSRP ISRSSRILNK  240
MATKLAPSKS LDLLKNRLSV PSKQSMASRS VSDTSTTGGT YNNIESPISI SDLLESMPTS  300
SSACESSELT GNLSMGEDQV NEAFAVLHQA MELETTATPE SPMYTTNELE ELLGNYGGDQ  360
DGATITNDVT KSKACDSQVA TSMEPATDFI EKFTNMPFGC RPNEYSTTKD NFYGEEESNG  420
GALEVNMNYW NEDFDWLITD CNN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G07690.1	1e-76	MYB family protein