PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021669807.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

CO-like

Protein Properties

Length: 360aa MW: 39901.9 Da PI: 6.5847

Description

CO-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021669807.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	25.8	2.2e-08	19	60	3	38
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Ht 38 +r+C+ ++ + fC+ ++ +lC +C +++H H+ XP_021669807.1 19 ARRCDYCKTAAAAAFCRADSAFLCLNCDTKIHAAnklvsrHE 60 689****99*******************6656666666 PP
2	zf-B_box	23.6	1.1e-07	62	107	3	42
zf-B_box 3 erkCpeHeekelqlfCedCqqllCedClleeHkg......Htvvpl 42 ++C+ +e+ ++ + C+ + lC C +H+ H++vp+ XP_021669807.1 62 VWMCEVCEQAPAAISCKADAAALCIICDADIHSAnplarrHERVPV 107 689*****************************66899999999986 PP
3	CCT	70.5	4.1e-24	287	330	1	44
CCT 1 ReaallRYkeKrktRkFeKkirYesRKavAesRpRvKGrFvkqa 44 Rea+++RY+eKrk+RkFeK+irY+sRKa+Ae+RpR+KGrF+k++ XP_021669807.1 287 REARVMRYREKRKNRKFEKTIRYASRKAYAETRPRIKGRFAKRT 330 9*****************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 360 aa Download sequence
MGIEVETLKT LAGGWTVAAR RCDYCKTAAA AAFCRADSAF LCLNCDTKIH AANKLVSRHE 60 RVWMCEVCEQ APAAISCKAD AAALCIICDA DIHSANPLAR RHERVPVEPF FDSAESIVKS 120 SPFNFLVPSD QNGGYHQQDD DMEGVSWLLP NPPDLNSKLC FENPEMKAAG DLFSPEMDPF 180 LDMEFHKSHS GATDSVVPVQ TKPAPIPVFN KEICYDVDLC RSKLSSFNYP SQSLSHSVSS 240 SSLDVGVVPD GNSMSDISYS YGRNTSSSTD PGGSTPNQAT QICGFDREAR VMRYREKRKN 300 RKFEKTIRYA SRKAYAETRP RIKGRFAKRT EIESDMDRLF DHPSSVSFMP QAQYGVVPSF

Sequence ? help Back to Top

Protein Sequence Length: 360 aa Download sequence

MGIEVETLKT LAGGWTVAAR RCDYCKTAAA AAFCRADSAF LCLNCDTKIH AANKLVSRHE  60
RVWMCEVCEQ APAAISCKAD AAALCIICDA DIHSANPLAR RHERVPVEPF FDSAESIVKS  120
SPFNFLVPSD QNGGYHQQDD DMEGVSWLLP NPPDLNSKLC FENPEMKAAG DLFSPEMDPF  180
LDMEFHKSHS GATDSVVPVQ TKPAPIPVFN KEICYDVDLC RSKLSSFNYP SQSLSHSVSS  240
SSLDVGVVPD GNSMSDISYS YGRNTSSSTD PGGSTPNQAT QICGFDREAR VMRYREKRKN  300
RKFEKTIRYA SRKAYAETRP RIKGRFAKRT EIESDMDRLF DHPSSVSFMP QAQYGVVPSF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G57660.1	2e-95	CO-like family protein