PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021669991.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 486aa    MW: 53800.6 Da    PI: 5.834
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021669991.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS331.31.8e-101954791374
            GRAS   1 lvelLlecAeavssgdle..laqalLarlselaspdg.dpmqRlaayfteALaarlar.svselykal.ppsetsekn......sseelaalklf 84 
                     l++lL+++Aea++  +++  la+ +L rl+el+sp++ ++m+Rlaayft AL+  l +  + + +k l +  + ++++      ++++laa++l+
  XP_021669991.1  95 LIHLLMAAAEALTGVNKSrdLARVILVRLKELVSPNDgTNMERLAAYFTDALQGLLEGaGGGGHSKHLiNNGPRHHHHrddhhhQADVLAAFQLL 189
                     689**********96665559***********8887669*****************98433333333323322222223457889999******* PP

            GRAS  85 sevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegpp..slRiTgvgspesg..skeeleetgerLakfAeelgvp 175
                     +++sP++kf+h+taNqaIleav +++r+Hi+D+di++G+QW++L+q+L sR++gpp  +lRiT++++  +g  s  +++etg+rL  fA+++g p
  XP_021669991.1 190 QDMSPYVKFGHFTANQAILEAVTQDRRIHIVDYDIMEGIQWASLMQSLVSRKDGPPtpHLRITALSRGGNGrrSIGTVQETGRRLVAFAASIGQP 284
                     ****************************************************776556*********888898999******************* PP

            GRAS 176 fefnvlvakrledleleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.nsesFlerflealeyysalfd 269
                     f+f+    ++ e++++++L++ +gEal+ n++l+l ++  +  ++     ++L+  k+l+P+++++ve+e+   +++ F+ rf+++l++ysa++d
  XP_021669991.1 285 FSFHQCRLDSDETFRPSSLKLVRGEALVMNCMLHLPHFSYRAPDSV---ASFLSGAKNLNPRLITLVEEEVGPiGDGGFVGRFMDSLHHYSAVYD 376
                     *****9999****************************985555555...59*******************9988********************* PP

            GRAS 270 sleaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveee.sgslvlgWk 363
                     slea +p e ++r+ vEr++lg++i   +a   ++r    e+   W e+l++ GFk+v++s  + +qaklll  ++ dgyrvee   + lvlgWk
  XP_021669991.1 377 SLEADFPMEGRARALVERVFLGPRIAGSLARIYRARG--DEEGCCWAEWLGAEGFKAVNISFANHCQAKLLLGLFN-DGYRVEELgCNRLVLGWK 468
                     ********************************99954..455689*******************************.******99579999**** PP

            GRAS 364 drpLvsvSaWr 374
                     +r+L+s+S W+
  XP_021669991.1 469 SRRLLSASIWT 479
                     **********6 PP
Sequence ? help Back to Top
Protein Sequence    Length: 486 aa     Download sequence    
MAMAIDGAFE LDFSGYSSTT TSTENDHHAC NWNDWSPVVD WEALSGPHDD FQDLIESMME  60
DGGFNQTTCN SNSLSTDTML VDEETSCEDF KGLRLIHLLM AAAEALTGVN KSRDLARVIL  120
VRLKELVSPN DGTNMERLAA YFTDALQGLL EGAGGGGHSK HLINNGPRHH HHRDDHHHQA  180
DVLAAFQLLQ DMSPYVKFGH FTANQAILEA VTQDRRIHIV DYDIMEGIQW ASLMQSLVSR  240
KDGPPTPHLR ITALSRGGNG RRSIGTVQET GRRLVAFAAS IGQPFSFHQC RLDSDETFRP  300
SSLKLVRGEA LVMNCMLHLP HFSYRAPDSV ASFLSGAKNL NPRLITLVEE EVGPIGDGGF  360
VGRFMDSLHH YSAVYDSLEA DFPMEGRARA LVERVFLGPR IAGSLARIYR ARGDEEGCCW  420
AEWLGAEGFK AVNISFANHC QAKLLLGLFN DGYRVEELGC NRLVLGWKSR RLLSASIWTS  480
PSECDL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G08250.11e-170GRAS family protein