PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021670744.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 580aa MW: 64744.9 Da PI: 6.8809

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021670744.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	13.4	0.00022	81	102	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C Cgk F + +L+ H+r H XP_021670744.1 81 ECRVCGKQFEFPRSLHGHMRHH 102 7*******************99 PP
2	zf-C2H2	19.8	2.1e-06	111	132	2	23
EETTTTEEESSHHHHHHHHHHT CS zf-C2H2 2 kCpdCgksFsrksnLkrHirtH 23 +C+ Cgk F++ +L+ H+r+H XP_021670744.1 111 RCKECGKGFRTLRSLTGHMRLH 132 7*******************99 PP
3	zf-C2H2	11.4	0.00097	411	433	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C +C+k F++ L H+ H XP_021670744.1 411 FQCRICNKIFPTYQALGGHQTFH 433 89************999999877 PP

Sequence ? help Back to Top
Protein Sequence Length: 580 aa Download sequence
MEQDHERKHV CKLCNKSFLS GRILGGHMRI HVARDSAKEE VKLENGNLSI EGYGLRENPK 60 KSWKSSGLNH NDSVSVQESL ECRVCGKQFE FPRSLHGHMR HHSVEERKGI RCKECGKGFR 120 TLRSLTGHMR LHSDKYKVSR ESMTGSRPSL VVMTLSDTGT AGLVRRKRSN RIRYKVTPNS 180 SFSSLNESAS GFEVEEEVEE VAMCLMMLSR GVCKWGEFKS IGESLDNSSV SFGFEVKSLH 240 QSNPTGGRSE DGDYVLEDDE PVKKKKPREQ KLDPCASDSK NKTSECSDCD SDMVCNKEKK 300 IALEVPIENF YQGVDSKGPK PEDESGLLLC DTETEKGIHD AVDSATESES SQEFTEEVGL 360 GLSGLGYVKC TRSKKATFEA CDAKMGKDSC TEVICSTSDF DTADDSKKSQ FQCRICNKIF 420 PTYQALGGHQ TFHRTTKSSV ALKIEQLQED IETKLLPDKI DLSSKLVNLE CIKDSGKEEV 480 NGVIMTSFQS KKSKEHKCHI CSKNFVSGQA LGGHKRAHHS KAREEQNMAM KQEDLDICDA 540 PDINVPGMLH TEANCEFGFE SWRAGIRSYK HESLVDLIAN

Sequence ? help Back to Top

Protein Sequence Length: 580 aa Download sequence

MEQDHERKHV CKLCNKSFLS GRILGGHMRI HVARDSAKEE VKLENGNLSI EGYGLRENPK  60
KSWKSSGLNH NDSVSVQESL ECRVCGKQFE FPRSLHGHMR HHSVEERKGI RCKECGKGFR  120
TLRSLTGHMR LHSDKYKVSR ESMTGSRPSL VVMTLSDTGT AGLVRRKRSN RIRYKVTPNS  180
SFSSLNESAS GFEVEEEVEE VAMCLMMLSR GVCKWGEFKS IGESLDNSSV SFGFEVKSLH  240
QSNPTGGRSE DGDYVLEDDE PVKKKKPREQ KLDPCASDSK NKTSECSDCD SDMVCNKEKK  300
IALEVPIENF YQGVDSKGPK PEDESGLLLC DTETEKGIHD AVDSATESES SQEFTEEVGL  360
GLSGLGYVKC TRSKKATFEA CDAKMGKDSC TEVICSTSDF DTADDSKKSQ FQCRICNKIF  420
PTYQALGGHQ TFHRTTKSSV ALKIEQLQED IETKLLPDKI DLSSKLVNLE CIKDSGKEEV  480
NGVIMTSFQS KKSKEHKCHI CSKNFVSGQA LGGHKRAHHS KAREEQNMAM KQEDLDICDA  540
PDINVPGMLH TEANCEFGFE SWRAGIRSYK HESLVDLIAN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G26610.1	1e-18	C2H2 family protein