PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021670802.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

HD-ZIP

Protein Properties

Length: 300aa MW: 33347.4 Da PI: 8.4993

Description

HD-ZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021670802.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	56.6	4.3e-18	134	188	2	56
T--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS Homeobox 2 rkRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56 rk+ +++keq +Lee F+++++++ +++ LAk+l+L rqV vWFqNrRa+ k XP_021670802.1 134 RKKLRLSKEQSLVLEETFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTK 188 788899***********************************************98 PP
2	HD-ZIP_I/II	125.5	2.5e-40	134	223	1	91
HD-ZIP_I/II 1 ekkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreel 91 +kk+rlskeq+ +LEe+F+e+++L+p++K +la++L+l+prqv+vWFqnrRARtk+kq+E+d+e+Lk+++++l++en+rL+kev+eLr +l XP_021670802.1 134 RKKLRLSKEQSLVLEETFKEHNTLNPKQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKKCCENLTQENRRLQKEVQELR-AL 223 69*************************************************************************************9.55 PP

Sequence ? help Back to Top
Protein Sequence Length: 300 aa Download sequence
MGEKEDGLGL GLSLSLGAAT QQIQPSLKLH LMPFPSELVQ NNHQRISLND LFQSSDRNSD 60 ARTFQRGIDM NRIPSVADCD DETGVSSPNS TVSSISGKRS EREQIGEETE AERASCSRDG 120 SDDEDGGAGG DASRKKLRLS KEQSLVLEET FKEHNTLNPK QKLALAKQLN LRPRQVEVWF 180 QNRRARTKLK QTEVDCEYLK KCCENLTQEN RRLQKEVQEL RALKLSPQLY MHMNPPTTLT 240 MCPSCERVAV SSSSSSSAAA ASSAPNRHPA NPHPQRPVPI KPWAALPIHH RSFDKPASRS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	133	139	SRKKLRL
2	183	191	RRARTKLKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G60390.1	4e-78	HD-ZIP family protein