PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021671039.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family GRAS
Protein Properties Length: 596aa    MW: 68010.5 Da    PI: 7.0222
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021671039.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS267.83.5e-822135811374
            GRAS   1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 
                     l +lLl++Ae v  ++  +a++lL+r + +as++++p+qR++ +f+eAL++r+ + + +  ++ +  + +  +  +   a+  f++  P+ ++++
  XP_021671039.1 213 LAHLLLTAAEKVGYQQYDRANRLLTRCEWIASERANPVQRVVYCFAEALRERIDKATGRFTQKEREAKCDIPHGLSFNLAVLSFHQNVPFNQITQ 307
                     579****************************************************4443333333222222334444455567************ PP

            GRAS  96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRp.egppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvakrledl 189
                     lt  qaI+e + +++++H+iD++i  G+QW a++qaLa+R+ ++  +l+iT+vg   +g ++++eetg+ L++fA++++ pf f++++++++ d+
  XP_021671039.1 308 LTSIQAIMENIGSARKLHVIDIEIRSGVQWTAMMQALAEREqRPLEHLKITTVGL--AGIHNKIEETGRSLERFAKSMNFPFTFKAIYVSSMMDM 400
                     ****************************************945556*********..679*********************************** PP

            GRAS 190 eleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseerik 284
                     + e +++  +E+laV + + l +l +++ +le+    +++++k+l+P+++ v+e ea+hns+ F++rf+eal ++sa fd+le+ + ++ e+++ 
  XP_021671039.1 401 KEELFEIAADESLAVVSNMVLRTLISSPDCLEN----LMRVIKNLNPTLMLVTEVEANHNSPIFVNRFIEALFFHSAYFDCLETCMEQNIEHKSI 491
                     *************************99999999....************************************************9999999999 PP

            GRAS 285 vErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvk.sdgyrveeesgslvlgWkdrpLvsvSaWr 374
                     +E++ ++  i+++va   +er++r  +   Wr+ ++++ + ++ +se+   qa l+ ++++ +   +++++ ++l+ gWk+ p+ s+SaW+
  XP_021671039.1 492 IEAA-FSHGIREIVAVGDKERIARSVKIDVWRAFFSRFRMVEIGFSESSSYQATLVHKQFPcGSSCTLDKNGKCLLVGWKGTPIHSLSAWK 581
                     9999.********************************************************9999*************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 596 aa     Download sequence    
MANALFSFTP FDFGGFQSDC PPEDYEKGEA VTKGKQYPLF SMEEQGQVYP LCSEYSAYHD  60
DLASNKGLHF FKYQHQQQQP PPPKSNCLTL DEFFGSCFRA PAQPIQEVKK SENISKPNKE  120
SSHPFVLSSS LELLNNYGSG IKKLYVNQFS NASNQTSHVE TRKKLSTEEV MRVAGARYIH  180
FSDPRYDDFS MLMHPFGYAL SGLSEEETRD VELAHLLLTA AEKVGYQQYD RANRLLTRCE  240
WIASERANPV QRVVYCFAEA LRERIDKATG RFTQKEREAK CDIPHGLSFN LAVLSFHQNV  300
PFNQITQLTS IQAIMENIGS ARKLHVIDIE IRSGVQWTAM MQALAEREQR PLEHLKITTV  360
GLAGIHNKIE ETGRSLERFA KSMNFPFTFK AIYVSSMMDM KEELFEIAAD ESLAVVSNMV  420
LRTLISSPDC LENLMRVIKN LNPTLMLVTE VEANHNSPIF VNRFIEALFF HSAYFDCLET  480
CMEQNIEHKS IIEAAFSHGI REIVAVGDKE RIARSVKIDV WRAFFSRFRM VEIGFSESSS  540
YQATLVHKQF PCGSSCTLDK NGKCLLVGWK GTPIHSLSAW KFSRERLGRF FANYRF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03450.17e-54GRAS family protein