PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021671175.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 418aa MW: 47439.7 Da PI: 9.4058

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021671175.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	54.9	2e-17	13	60	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg W++eEde+l++ ++ +G g+W+++++ g+ R++k+c++rw +yl XP_021671175.1 13 RGLWSPEEDEKLIKFITTYGHGSWSSVPKLAGLQRCGKSCRLRWINYL 60 788*******************************************97 PP
2	Myb_DNA-binding	49.2	1.2e-15	66	109	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg++T++E+ ++d ++ lG++ W+ Ia++++ gRt++++k++w++ XP_021671175.1 66 RGSFTAQEEMTIIDIHRILGNR-WAQIAKHLP-GRTDNEIKNFWNS 109 89******************.*****.*********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 418 aa Download sequence
MGHQCCSKQK VKRGLWSPEE DEKLIKFITT YGHGSWSSVP KLAGLQRCGK SCRLRWINYL 60 RPDLKRGSFT AQEEMTIIDI HRILGNRWAQ IAKHLPGRTD NEIKNFWNSC IKKKLIAQGL 120 DPNTHKLLSP SYKQNCNNNT PYGLSADSHY QPILSSSVSS AVSPQMKDFS MDVKKTPFNL 180 SFLSIPPPDA NSSCLHPLHI SSTCEQQNSN MQTFLDCASQ SISKRSVTIS CSNSNPFGFG 240 VIEDRSLWSG DIEPIQSSRN EEVPAEQVAE IEKTNEHMST GQNLCSTETE TRTRGNAETD 300 TGKRHFKKHS KRKRGETCKY KKYRNAFPAT ETRFRFSIFS ETARKRFRAV SVRFLVGNVS 360 DTGKRHSVPF PCFIGRNMVA SFQSSHFDFD FAECTLMPEM YYTASPVDQL TWTLQALQ

Sequence ? help Back to Top

Protein Sequence Length: 418 aa Download sequence

MGHQCCSKQK VKRGLWSPEE DEKLIKFITT YGHGSWSSVP KLAGLQRCGK SCRLRWINYL  60
RPDLKRGSFT AQEEMTIIDI HRILGNRWAQ IAKHLPGRTD NEIKNFWNSC IKKKLIAQGL  120
DPNTHKLLSP SYKQNCNNNT PYGLSADSHY QPILSSSVSS AVSPQMKDFS MDVKKTPFNL  180
SFLSIPPPDA NSSCLHPLHI SSTCEQQNSN MQTFLDCASQ SISKRSVTIS CSNSNPFGFG  240
VIEDRSLWSG DIEPIQSSRN EEVPAEQVAE IEKTNEHMST GQNLCSTETE TRTRGNAETD  300
TGKRHFKKHS KRKRGETCKY KKYRNAFPAT ETRFRFSIFS ETARKRFRAV SVRFLVGNVS  360
DTGKRHSVPF PCFIGRNMVA SFQSSHFDFD FAECTLMPEM YYTASPVDQL TWTLQALQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	343	349	ARKRFRA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G12720.1	2e-81	MYB family protein