PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021671200.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

NF-YC

Protein Properties

Length: 250aa MW: 27903.3 Da PI: 6.3031

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021671200.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	173.7	1.9e-54	77	180	1	101
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92 ql++fw +q ++k+ dfknh+lPlarikki+kadedv+misaeaPv++++ace+fileltlrsw+h+eenkrrtl+k+diaaa+trtdifdfl XP_021671200.1 77 QLQTFWVNQyqkVDKVVDFKNHSLPLARIKKIMKADEDVRMISAEAPVVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFL 171 89****98888999*************************************************************************** PP NF-YC 93 vdivprdel 101 vdivpr++l XP_021671200.1 172 VDIVPREDL 180 ****987 PP

Sequence ? help Back to Top
Protein Sequence Length: 250 aa Download sequence
MDQQGYGQPP PAGVVGSTGQ MPYGTNPYQP NQTSSAQNPG SIGTIQSAGQ PAGAQLAQNQ 60 LAYQQIHHQQ QQQLQQQLQT FWVNQYQKVD KVVDFKNHSL PLARIKKIMK ADEDVRMISA 120 EAPVVFARAC EMFILELTLR SWNHTEENKR RTLQKNDIAA AITRTDIFDF LVDIVPREDL 180 KDEVLASISR EAMPVGGPAD ALPYGYMPPH HVAQVGTPGM IYAQQSHAYM AQQIWPQQGS 240 EERQQSPSDH

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	150	156	RRTLQKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G54830.3	2e-80	NF-YC family protein