PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021671275.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 317aa    MW: 36323.6 Da    PI: 6.6271
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021671275.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding56.18.3e-182572148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     rg+WT eEd ll ++++++G g+W+  a++ g++Rt+k+c++rw++yl
   XP_021671275.1 25 RGPWTLEEDTLLTHYIARHGEGRWNMLAKYAGLKRTGKSCRLRWLNYL 72
                     89********************************************97 PP
2Myb_DNA-binding52.51.1e-1678121146
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 
                      rg+ T++E++l+++++ ++G++ W++Ia++++ gRt++++k++w++
   XP_021671275.1  78 RGNLTPQEQLLILELHSKWGNR-WSKIAQHLP-GRTDNEIKNYWRT 121
                      7999******************.*********.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 317 aa     Download sequence    
MRTPVPSSVT KGICNSREEE SELRRGPWTL EEDTLLTHYI ARHGEGRWNM LAKYAGLKRT  60
GKSCRLRWLN YLKPDIKRGN LTPQEQLLIL ELHSKWGNRW SKIAQHLPGR TDNEIKNYWR  120
TRVQRQARQL NIESNSKRFL DAVRCYWMPR LLQKVEQNCN SSYPLSTLDS QTHVIASASS  180
TNFTVDNSSS SESFPPQTKL AQYSNLASEH SSSVTSPSVL STDSMPISRQ PEFLENPAII  240
SPPLLDNTVN NNLILSDGYY VENSGYHMDG FNPASMPEIG TFGDSTSECQ MAEGNWVFDY  300
DMTDTLWNMD DIWQFRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68320.15e-94MYB family protein