PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021671288.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

E2F/DP

Protein Properties

Length: 387aa MW: 43052.4 Da PI: 8.728

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021671288.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	73.5	2.3e-23	20	85	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rk+ksL+ll+++fl+l+ + +++ l+++a++L v +rRRiYDi+NVLe+++++++k+kn+++wkg XP_021671288.1 20 RKQKSLGLLCTNFLSLYDRDGIEVIGLDDAASKL---GV--ERRRIYDIVNVLESVGVLARKAKNKYTWKG 85 79***************999********.....****************************98 PP
2	E2F_TDP	72.7	4.1e-23	160	241	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse.......dvknkrRRiYDilNVLealnliek.....kekneirwkg 71 rkeksL+lltq+f+kl+ +s+ + ++l+e+ak L+ + k+RR+YDi+NVL++l+liek +k+++rw g XP_021671288.1 160 RKEKSLGLLTQNFVKLFVCSKVDLISLDEAAKLLLGDahnssimR-TAKVRRLYDIANVLSSLKLIEKthtaeARKPAFRWLG 241 79*************************************9742.2589**************9999999****87 PP

Sequence ? help Back to Top
Protein Sequence Length: 387 aa Download sequence
MPLSSTEGPE SSCRHHNYSR KQKSLGLLCT NFLSLYDRDG IEVIGLDDAA SKLGVERRRI 60 YDIVNVLESV GVLARKAKNK YTWKGFGAIP KALQELKEEG LRENLSSFDK QQSSNCEKLS 120 DDENDDEDDC DSNPNTGSQN DNLIPSGIVK SKAASRFDNR KEKSLGLLTQ NFVKLFVCSK 180 VDLISLDEAA KLLLGDAHNS SIMRTAKVRR LYDIANVLSS LKLIEKTHTA EARKPAFRWL 240 GLRGKPESGS GDSLAESRKR TFGADVTNIC LKRNKVDSSA DGEKSNNLKL PNQIKVENVV 300 TIADTSTSGQ DFPTSYQFGP FAPVTVAKVG GSDNKLTQTH DWESLASTYR PHYHNQALRE 360 LFAHYMEAWK SWYTEVAGKK KPIQQVS

Sequence ? help Back to Top

Protein Sequence Length: 387 aa Download sequence

MPLSSTEGPE SSCRHHNYSR KQKSLGLLCT NFLSLYDRDG IEVIGLDDAA SKLGVERRRI  60
YDIVNVLESV GVLARKAKNK YTWKGFGAIP KALQELKEEG LRENLSSFDK QQSSNCEKLS  120
DDENDDEDDC DSNPNTGSQN DNLIPSGIVK SKAASRFDNR KEKSLGLLTQ NFVKLFVCSK  180
VDLISLDEAA KLLLGDAHNS SIMRTAKVRR LYDIANVLSS LKLIEKTHTA EARKPAFRWL  240
GLRGKPESGS GDSLAESRKR TFGADVTNIC LKRNKVDSSA DGEKSNNLKL PNQIKVENVV  300
TIADTSTSGQ DFPTSYQFGP FAPVTVAKVG GSDNKLTQTH DWESLASTYR PHYHNQALRE  360
LFAHYMEAWK SWYTEVAGKK KPIQQVS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48160.2	1e-133	E2F/DP family protein