PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021671667.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 293aa MW: 33669.8 Da PI: 7.2045

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021671667.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	51.5	2.3e-16	17	64	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd++l ++v ++G g+W++++ g+ R +k+c++rw +yl XP_021671667.1 17 KGLWSPEEDQRLRNYVLKHGHGCWSSVPINAGLQRNGKSCRLRWINYL 64 678*******************************************97 PP
2	Myb_DNA-binding	49.7	8.7e-16	70	115	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg ++ +E+e ++ ++++lG++ W+ Ia++++ gRt++++k++w+++l XP_021671667.1 70 RGMFSLQEEETILTLHRLLGNK-WSQIAQHLP-GRTDNEIKNYWHSHL 115 7889****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 293 aa Download sequence
MGCRSSDKPK PKPKHRKGLW SPEEDQRLRN YVLKHGHGCW SSVPINAGLQ RNGKSCRLRW 60 INYLRPGLKR GMFSLQEEET ILTLHRLLGN KWSQIAQHLP GRTDNEIKNY WHSHLKKKVL 120 KADQAMDEAN TSSDNLEPNS PNKLTITQTP NYESLLMNVE KSPTDTDRLV PQLSESPKQP 180 NRSSLPKLMF AEWLSLDSFS SLSEAIMASK DQNNSSFMDN FMQGCFLNEG TLFGNSEYRN 240 SPLNDASPED MFSPQFKFEC HSSGNDQFVD FSSGEDICSE FNMKNDLRYI YEY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25560.1	3e-67	MYB family protein