PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021672089.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Nin-like

Protein Properties

Length: 1001aa MW: 110176 Da PI: 5.4107

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021672089.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	91.3	7.1e-29	594	644	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek+isle+l++yF++++kdAAk+Lgvc+T++KriCRq+GI+RWP+Rki+++ XP_021672089.1 594 EKSISLEVLQQYFAGSLKDAAKSLGVCPTTMKRICRQHGISRWPSRKISKV 644 799*********************************************997 PP

Sequence ? help Back to Top
Protein Sequence Length: 1001 aa Download sequence
MPEREDDKSK ENQTVGGDKG ETLMDLDPDL DTSWPLDQIS FLSNPLSPLL LSSSDQPCSP 60 LWSFSDADDD KLLPASSSSH ATPPPPLCFT DYPIFLACKP NSVTENHTEI DDRRKIPSPL 120 LGLMPIDNPD GYCVIKERMT QALRNFKEST EQHVLAQIWA PMKSGGRYVL TTSGQPFVID 180 PYSNGLHQYR MVSLMYMFSV DGNCEGELGL PGRVFRQKLP EWTPNVQYYS SKEYPRRDHA 240 LHYNVQGTLA LPVFERSGQS CVGVLELIMT SQKINYGPEV DKVCKALEAV NLKSSEILDH 300 SSTQICNEGR KNALAEILEI LTVVCETHKL ALAQTWVPCM HRSVLAFGGG LKKSCTSFDG 360 SCNSQVCMST TDVAFYVVDP HMWGFREACL EHHLQKGQGV AGRAFLFHNA CFCPDITQFC 420 KTEYPLVHYA RMFGLGGCFA ICLRSSYTGD DDYILEFFLP PTVSDNYEQK TLLGFLLATM 480 KQHFQSLKVA SGMDLEEEEG FVEIIQTSMS GKLDLRLECI QIPESPKSPP NVNTSPKEGQ 540 MAQPDPLKHQ LMVNLDVVDN GGNKGHAEGS HFPTSLPGNK GNKKPSERKR GKTEKSISLE 600 VLQQYFAGSL KDAAKSLGVC PTTMKRICRQ HGISRWPSRK ISKVNRSLSK LKRVIESVQG 660 AEGTFNLTHL TTSSLPVAVG SISWPSNLNG CNQQSSLNSK SPEPNDEKKG SPICKAAGSD 720 GQGGGENQLI GGRILSCEEL VLQNGFSPEI GLVSDRFKAG NVLGEESAGT STSHGSCQGS 780 PANDSAAAKD SPITPVHEQC DKVGIAPELE FQPKRELNLS AAYSIPDAIV ATEAQAPFGE 840 ILIEDAGSSK DLRNLCPSVA DTILEERVPE SSWTNHLVPD FPTTQAMAAQ EHEMPQIRAR 900 QEMKTVTIKA TYREDIIRFR IYPSSGIVEL KEKVAKRLKL EVGNFDIKYL DDDHEWVLIA 960 CDADLQECID FSRSSGSSII RLSVHDMNAN LGSSWESNGE L

Sequence ? help Back to Top

Protein Sequence Length: 1001 aa Download sequence

MPEREDDKSK ENQTVGGDKG ETLMDLDPDL DTSWPLDQIS FLSNPLSPLL LSSSDQPCSP  60
LWSFSDADDD KLLPASSSSH ATPPPPLCFT DYPIFLACKP NSVTENHTEI DDRRKIPSPL  120
LGLMPIDNPD GYCVIKERMT QALRNFKEST EQHVLAQIWA PMKSGGRYVL TTSGQPFVID  180
PYSNGLHQYR MVSLMYMFSV DGNCEGELGL PGRVFRQKLP EWTPNVQYYS SKEYPRRDHA  240
LHYNVQGTLA LPVFERSGQS CVGVLELIMT SQKINYGPEV DKVCKALEAV NLKSSEILDH  300
SSTQICNEGR KNALAEILEI LTVVCETHKL ALAQTWVPCM HRSVLAFGGG LKKSCTSFDG  360
SCNSQVCMST TDVAFYVVDP HMWGFREACL EHHLQKGQGV AGRAFLFHNA CFCPDITQFC  420
KTEYPLVHYA RMFGLGGCFA ICLRSSYTGD DDYILEFFLP PTVSDNYEQK TLLGFLLATM  480
KQHFQSLKVA SGMDLEEEEG FVEIIQTSMS GKLDLRLECI QIPESPKSPP NVNTSPKEGQ  540
MAQPDPLKHQ LMVNLDVVDN GGNKGHAEGS HFPTSLPGNK GNKKPSERKR GKTEKSISLE  600
VLQQYFAGSL KDAAKSLGVC PTTMKRICRQ HGISRWPSRK ISKVNRSLSK LKRVIESVQG  660
AEGTFNLTHL TTSSLPVAVG SISWPSNLNG CNQQSSLNSK SPEPNDEKKG SPICKAAGSD  720
GQGGGENQLI GGRILSCEEL VLQNGFSPEI GLVSDRFKAG NVLGEESAGT STSHGSCQGS  780
PANDSAAAKD SPITPVHEQC DKVGIAPELE FQPKRELNLS AAYSIPDAIV ATEAQAPFGE  840
ILIEDAGSSK DLRNLCPSVA DTILEERVPE SSWTNHLVPD FPTTQAMAAQ EHEMPQIRAR  900
QEMKTVTIKA TYREDIIRFR IYPSSGIVEL KEKVAKRLKL EVGNFDIKYL DDDHEWVLIA  960
CDADLQECID FSRSSGSSII RLSVHDMNAN LGSSWESNGE L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G24020.1	0.0	Nin-like family protein