PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021672127.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family M-type_MADS
Protein Properties Length: 212aa    MW: 23822.2 Da    PI: 9.6978
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021672127.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF70.31.7e-221663249
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEE CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyey 49
                    +i+ ks  qvtfskRr+g++KKA+EL++LC++e+a+i+fs+ +k + +
  XP_021672127.1 16 KISKKSHLQVTFSKRRAGLFKKASELCTLCGVEIAIIVFSPANKAFSF 63
                    799***************************************997766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 212 aa     Download sequence    
MVKRSSLGRQ KIAMEKISKK SHLQVTFSKR RAGLFKKASE LCTLCGVEIA IIVFSPANKA  60
FSFGHPEVES ILERFLARNP PPTSGAHQII EAHRNANVRE LNAQLTHILN QLEQERKQAE  120
EFKQITKSSQ SHCWWEAPVH DLGLHELETL RDALEELKKS VTKQANKILV EPKNSSPFLA  180
ANGIGHVSDY ESKVNELNFA SSATSYVKNF GY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60440.17e-58M-type_MADS family protein