PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021672331.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 368aa MW: 41877 Da PI: 6.26

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021672331.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	52.9	8.6e-17	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEde+l+++++++G g+W+++++ g+ R++k+c++rw +yl XP_021672331.1 14 KGLWSPEEDEKLYNYITRFGVGCWSSVPKLAGLQRCGKSCRLRWINYL 61 678*******************************************97 PP
2	Myb_DNA-binding	45.6	1.6e-14	67	110	1	46
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 rg ++++E++l + +++ lG++ W+ Ia++++ gRt++++k++w++ XP_021672331.1 67 RGMFSQQEEDLVISLHEVLGNR-WAQIAAELP-GRTDNEIKNFWNS 110 788*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 368 aa Download sequence
MGRPSCCLKQ KLRKGLWSPE EDEKLYNYIT RFGVGCWSSV PKLAGLQRCG KSCRLRWINY 60 LRPDLKRGMF SQQEEDLVIS LHEVLGNRWA QIAAELPGRT DNEIKNFWNS CLKKKLMKQG 120 LDPATHKPIS EALQVKEEKN CKDKASLQIP PSKGLPVVSN TTIQEPTFLI NDTTYYGNGL 180 TETSREQFMN KQVYDPLSYF EFSAGFEPCG YNSSNIPGLQ HPNLRPFDQN HFERSSNFSF 240 TSMPSLTSFD NGSLSATDFS YNSASRMSSM FLNEAKESSS NSSNISSYTG YQMNRMVENN 300 AAFSWDADNK IDCVFQFPMN GIKMEELRQS PWEEGQLHTQ NSVDFSSYPL TSLSEDLAGV 360 NFEVYHQI

Sequence ? help Back to Top

Protein Sequence Length: 368 aa Download sequence

MGRPSCCLKQ KLRKGLWSPE EDEKLYNYIT RFGVGCWSSV PKLAGLQRCG KSCRLRWINY  60
LRPDLKRGMF SQQEEDLVIS LHEVLGNRWA QIAAELPGRT DNEIKNFWNS CLKKKLMKQG  120
LDPATHKPIS EALQVKEEKN CKDKASLQIP PSKGLPVVSN TTIQEPTFLI NDTTYYGNGL  180
TETSREQFMN KQVYDPLSYF EFSAGFEPCG YNSSNIPGLQ HPNLRPFDQN HFERSSNFSF  240
TSMPSLTSFD NGSLSATDFS YNSASRMSSM FLNEAKESSS NSSNISSYTG YQMNRMVENN  300
AAFSWDADNK IDCVFQFPMN GIKMEELRQS PWEEGQLHTQ NSVDFSSYPL TSLSEDLAGV  360
NFEVYHQI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G26660.1	8e-80	MYB family protein