PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021672496.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 215aa MW: 24211.2 Da PI: 7.4675

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021672496.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	30.8	6.8e-10	13	50	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W+++Ed++l+d+++ +G g ++R++k+c++rw +yl XP_021672496.1 13 KGAWSKQEDQKLIDYITIHGEG----------LHRCGKSCRLRWINYL 50 79****************99..........79**********97 PP
2	Myb_DNA-binding	52.3	1.3e-16	56	101	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++ ++E++l+++++++lG++ W++Ia +++ gRt++++k++w+++l XP_021672496.1 56 RGNFAQDEEDLIIKLHALLGNR-WSLIAGRLP-GRTDNEVKNYWNSHL 101 8999****************.*****.**********986 PP

Sequence ? help Back to Top
Protein Sequence Length: 215 aa Download sequence
MRKPCCDKQG NNKGAWSKQE DQKLIDYITI HGEGLHRCGK SCRLRWINYL RPDIKRGNFA 60 QDEEDLIIKL HALLGNRWSL IAGRLPGRTD NEVKNYWNSH LRKKLINMGI DPNNHRLNQI 120 LPRPQPERVS SPIDEDTCKT KKSTGDYIDR VSDAASSSLE ENETSAGSSD INLDLTIAVP 180 SSAHTSTSET RPENCDTAAT SEVRSETLPT LLLFL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G22640.1	1e-63	MYB family protein