PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021672514.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

NF-YC

Protein Properties

Length: 231aa MW: 26968.9 Da PI: 6.2231

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021672514.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	135.4	1.6e-42	57	160	2	101
NF-YC 2 lksfwekq...iekatdfk.nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92 l fw++q i + fk +h+lPlarik+i+k+d +vkmisae+P l+skacelfileltlr+wl++e +krrtl+++dia a+ +++ dfl XP_021672514.1 57 LAIFWNQQlleIHNIPAFKsHHQLPLARIKRIMKYDGEVKMISAETPLLFSKACELFILELTLRAWLQTEVCKRRTLQRCDIARAIRTSHTLDFL 151 778***87777788899889********************************************************************* PP NF-YC 93 vdivprdel 101 ++vp d++ XP_021672514.1 152 AEVVPFDHH 160 ***9965 PP

Sequence ? help Back to Top
Protein Sequence Length: 231 aa Download sequence
MDLNQSIEFN LSSSISPQLH NFMPMSCFLL PTYHHSTEEG CEESRNSHFM QVLKQNLAIF 60 WNQQLLEIHN IPAFKSHHQL PLARIKRIMK YDGEVKMISA ETPLLFSKAC ELFILELTLR 120 AWLQTEVCKR RTLQRCDIAR AIRTSHTLDF LAEVVPFDHH KDGETENCSD ELEPLPAIQV 180 PFPVIDINED FVLTNHGIAQ QFMMRTSTSP VEFNYEFDFK FNCKPLQKHN F

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48590.1	1e-37	NF-YC family protein