PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021672516.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

NF-YC

Protein Properties

Length: 227aa MW: 26476.3 Da PI: 6.0692

Description

NF-YC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021672516.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NF-YC	135.5	1.6e-42	57	160	2	101
NF-YC 2 lksfwekq...iekatdfk.nhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92 l fw++q i + fk +h+lPlarik+i+k+d +vkmisae+P l+skacelfileltlr+wl++e +krrtl+++dia a+ +++ dfl XP_021672516.1 57 LAIFWNQQlleIHNIPAFKsHHQLPLARIKRIMKYDGEVKMISAETPLLFSKACELFILELTLRAWLQTEVCKRRTLQRCDIARAIRTSHTLDFL 151 778***87777788899889********************************************************************* PP NF-YC 93 vdivprdel 101 ++vp d++ XP_021672516.1 152 AEVVPFDHH 160 ***9965 PP

Sequence ? help Back to Top
Protein Sequence Length: 227 aa Download sequence
MDLNQSIEFN LSSSISPQLH NFMPMSCFLL PTYHHSTEEG CEESRNSHFM QVLKQNLAIF 60 WNQQLLEIHN IPAFKSHHQL PLARIKRIMK YDGEVKMISA ETPLLFSKAC ELFILELTLR 120 AWLQTEVCKR RTLQRCDIAR AIRTSHTLDF LAEVVPFDHH KDGETENCSD ELEPLPAIQV 180 PFPVIDINED FVLTNHGIAQ QFMMRTSTSP VEFNYEFDFK PLQKHNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48590.1	8e-38	NF-YC family protein