PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021672550.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

bHLH

Protein Properties

Length: 357aa MW: 40888.2 Da PI: 4.5633

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021672550.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	23	1.4e-07	132	217	7	55
HHHHHHHHHHHHHHHHHHCTSCC.C.......................................TTS-STCHHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPk.as....................................kapskKlsKaeiLekAveYIksLq 55 + ErrRR r+++++ Lr+l+P+ + + ++ a+i Av+Y++++q XP_021672550.1 132 ISERRRRGRMKEKLYALRSLVPNiTKvinlncinhcsfffffffffffffflsfcvpnndnmLEINVQMDNASIIGDAVQYVQEMQ 217 67*******************666*******************************************************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
MDDASARNLH LMLDANNDFE LHDFIDEANF DQFIDLIRGD NEDHQITAGF DSELINGLLV 60 DNQFGNPTQE DVFDFSAMVP DQNFIPNITL PNFEADMKEI EEDNDGEEDS SGTITTTTTT 120 RKTKTDRSRT LISERRRRGR MKEKLYALRS LVPNITKVIN LNCINHCSFF FFFFFFFFFF 180 FFLSFCVPNN DNMLEINVQM DNASIIGDAV QYVQEMQMQA KKLKNEIAGL EASLAGSDRS 240 QGSTKNLRKL HIANNKNLIW KKIIQMDVFQ VEERGFYVRL MCNRGDGVAV SLYRTLESLT 300 SFKIQSSNLT TAAETLTLTF TLNVKENEKD VNLPNLKLWI TGALFNQGFE FFTALSA

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

MDDASARNLH LMLDANNDFE LHDFIDEANF DQFIDLIRGD NEDHQITAGF DSELINGLLV  60
DNQFGNPTQE DVFDFSAMVP DQNFIPNITL PNFEADMKEI EEDNDGEEDS SGTITTTTTT  120
RKTKTDRSRT LISERRRRGR MKEKLYALRS LVPNITKVIN LNCINHCSFF FFFFFFFFFF  180
FFLSFCVPNN DNMLEINVQM DNASIIGDAV QYVQEMQMQA KKLKNEIAGL EASLAGSDRS  240
QGSTKNLRKL HIANNKNLIW KKIIQMDVFQ VEERGFYVRL MCNRGDGVAV SLYRTLESLT  300
SFKIQSSNLT TAAETLTLTF TLNVKENEKD VNLPNLKLWI TGALFNQGFE FFTALSA

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G28160.1	2e-58	bHLH family protein