PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021672613.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

MYB

Protein Properties

Length: 307aa MW: 34832.9 Da PI: 7.5959

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021672613.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	47.9	3.1e-15	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg+WT+ Ed+ l +vk +G g W+ +++ g++R++k+c++rw++yl XP_021672613.1 14 RGAWTALEDKTLTAYVKAHGEGKWRNLPKRAGLKRCGKSCRLRWLNYL 61 89********************************************97 PP
2	Myb_DNA-binding	50.9	3.6e-16	67	111	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 rg+ + +E+el+++++k+lG++ W++Ia +++ gRt++++k++w++ XP_021672613.1 67 RGNISRDEEELIIRLHKLLGNR-WSLIAGRLP-GRTDNEIKNYWNTT 111 788999**************.*****.**********87 PP

Sequence ? help Back to Top
Protein Sequence Length: 307 aa Download sequence
MGRSPCCSKE GLNRGAWTAL EDKTLTAYVK AHGEGKWRNL PKRAGLKRCG KSCRLRWLNY 60 LRPDIKRGNI SRDEEELIIR LHKLLGNRWS LIAGRLPGRT DNEIKNYWNT TLGKKVNAQS 120 TSPQSKHDTA TYSRQKRLTT EPNSNKASNS PQPAKVIRTK ATRCTKVLIP LQSSPLQPEF 180 HTLNPTANSD TLPQTFSPNH PNQDFDSSRL LHSGTFTNQD LHQDYDHDLD FLNLDCHEFQ 240 ASHGDGALVD YNYKENLSMG LDHHQSVPLE EPTMFNDWVT STCLDDNANL DLESLAVLLE 300 SEEWALQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G16720.1	1e-62	MYB family protein