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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
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| TF ID | XP_021672767.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
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| Family | C2H2 | ||||||||
| Protein Properties | Length: 190aa MW: 20612.5 Da PI: 10.0973 | ||||||||
| Description | C2H2 family protein | ||||||||
| Gene Model |
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| Signature Domain? help Back to Top | |||||||
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| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | zf-C2H2 | 13.8 | 0.00017 | 47 | 69 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS
zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23
++C+ C + F ++ L H++ H
XP_021672767.1 47 FECHFCRRAFANSQALGGHQNAH 69
89******************988 PP
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| Sequence ? help Back to Top |
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| Protein Sequence Length: 190 aa Download sequence |
MAESSAPSQQ SCHKPAASSA LKLFGFPLTE HREILAKTEN CAESRKFECH FCRRAFANSQ 60 ALGGHQNAHK RERQRARRVQ YYCDRRLFTA APVLSTHAVK ASSSSISTGG FTSVGVAAKF 120 RPQAAASHCP SSTTRPLLLP SPPSKLTSLI YVRQPLHVGT AMPSFVEFPG KSLSDEDVGI 180 DLCLKLTPSV |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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| Hit ID | E-value | Description | ||||
| AT1G80730.1 | 4e-14 | C2H2 family protein | ||||




