PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021672902.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MIKC_MADS
Protein Properties Length: 230aa    MW: 26765.3 Da    PI: 9.0147
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021672902.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF978.2e-31959151
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    krienk+nrqvtfskRr g+lKKA+E+SvLCdaeva+i+fs++gkl+eys+
  XP_021672902.1  9 KRIENKINRQVTFSKRRSGLLKKAHEISVLCDAEVALIVFSTKGKLFEYST 59
                    79***********************************************96 PP
2K-box82.59.4e-2810517035100
           K-box  35 qRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                      Rh++G dL++LslkeLq+Leqq++++lk+iRs+Kn+l++e+i elqkk k+lqe+n++L kk++e
  XP_021672902.1 105 CRHFMGRDLDTLSLKELQSLEQQIDSALKHIRSRKNQLMYESIAELQKKDKALQEQNNQLAKKVKE 170
                     5**************************************************************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MGRGRVQLKR IENKINRQVT FSKRRSGLLK KAHEISVLCD AEVALIVFST KGKLFEYSTD  60
SSMERILERY ERYSYAERQL VATDTETNEQ LEKQDGIFHF QLYVCRHFMG RDLDTLSLKE  120
LQSLEQQIDS ALKHIRSRKN QLMYESIAEL QKKDKALQEQ NNQLAKKVKE KEKEMAQQTQ  180
MEQQNHGVDS STVTAQSLNI RGNRGEDETT PIQHRGNAIL PAWMLPHLNE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G60910.13e-75MIKC_MADS family protein