PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021673009.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

Nin-like

Protein Properties

Length: 348aa MW: 39353.4 Da PI: 7.044

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021673009.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	79	5e-25	256	306	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 + +++l+d yF+lpi++AA+ +++c+Tv+K+iCR+yG++RWP+Rkiks+ XP_021673009.1 256 TGKLTLKDFDPYFHLPIEEAARLMNICPTVVKKICRKYGMSRWPFRKIKSI 306 5689*********************************************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 348 aa Download sequence
MADPQHTFPY HDPYDSPFNY EYLDFMTDSY PTLDNLPSGD VPTSLHPSSD NIADPNHCFD 60 YPMIWDTGNQ SNSGGQSLGE GPSQSRKRRA AENLQPNCPD GGRPISVWPP PPAPFWCTCC 120 QVLREIIHTD GNCTKRLEIH GRLGLICHAI LESKNQVQDG SSVSRYHMFD FCKKSIDGVK 180 QFLQQYCYDQ TKAGYVMLQD PLSVFYEALC VGIEWDENLH NDASIYSGGH RANQTEGGNE 240 PLRSSKSILA QQRERTGKLT LKDFDPYFHL PIEEAARLMN ICPTVVKKIC RKYGMSRWPF 300 RKIKSIEKQI LSLRANSISI NAEERARTAA EIQRLEQKIS KLCAGGKN

Sequence ? help Back to Top

Protein Sequence Length: 348 aa Download sequence

MADPQHTFPY HDPYDSPFNY EYLDFMTDSY PTLDNLPSGD VPTSLHPSSD NIADPNHCFD  60
YPMIWDTGNQ SNSGGQSLGE GPSQSRKRRA AENLQPNCPD GGRPISVWPP PPAPFWCTCC  120
QVLREIIHTD GNCTKRLEIH GRLGLICHAI LESKNQVQDG SSVSRYHMFD FCKKSIDGVK  180
QFLQQYCYDQ TKAGYVMLQD PLSVFYEALC VGIEWDENLH NDASIYSGGH RANQTEGGNE  240
PLRSSKSILA QQRERTGKLT LKDFDPYFHL PIEEAARLMN ICPTVVKKIC RKYGMSRWPF  300
RKIKSIEKQI LSLRANSISI NAEERARTAA EIQRLEQKIS KLCAGGKN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G64530.1	2e-11	Nin-like family protein