PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021673019.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

GATA

Protein Properties

Length: 165aa MW: 18460.1 Da PI: 9.6977

Description

GATA family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021673019.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	GATA	60.7	1.8e-19	30	64	1	35
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 C+ C+ttkTplWR+gp g+k+LCnaCG++yrk+++ XP_021673019.1 30 CTVCKTTKTPLWRSGPAGPKSLCNACGIRYRKRRR 64 9*******************************985 PP

Sequence ? help Back to Top
Protein Sequence Length: 165 aa Download sequence
MVIGVMDDLG EKKSLHDDEQ DKSIEIKNAC TVCKTTKTPL WRSGPAGPKS LCNACGIRYR 60 KRRRSILRLD EDSEKKKRSH CTTLTSTAVN SSTSATSVNG VNGNELGESL KIRLIVEGGK 120 RKFEISSVVK KQTCQRRREL EEEEQAAFSL MALSCDSFFA CNRKR

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	60	64	RKRRR
2	60	65	RKRRRS
3	60	78	RKRRRSILRLDEDSEKKKR
4	61	79	RKRRRSILRLDEDSEKKKR
5	62	80	RKRRRSILRLDEDSEKKKR
6	75	80	KKKRSH
7	76	81	KKKRSH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G06740.1	7e-15	GATA family protein