PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021673148.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MYB
Protein Properties Length: 266aa    MW: 29934.7 Da    PI: 4.718
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021673148.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.45.9e-171461148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd++l+  ++++G  +W++ ++  g+ R++k+c++rw +yl
   XP_021673148.1 14 KGPWTPEEDKILISHIQKYGHSNWRALPKLAGLLRCGKSCRLRWINYL 61
                     79******************************99************97 PP
2Myb_DNA-binding56.28e-1867112148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      rg++T+eE+e +++++++lG++ W++Ia++++ gRt++++k+ w+++l
   XP_021673148.1  67 RGNFTEEEEETIIKLHEMLGNR-WSAIAAKLP-GRTDNEIKNVWHTHL 112
                      89********************.*********.************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MVRAPCCEKM GLKKGPWTPE EDKILISHIQ KYGHSNWRAL PKLAGLLRCG KSCRLRWINY  60
LRPDIKRGNF TEEEEETIIK LHEMLGNRWS AIAAKLPGRT DNEIKNVWHT HLKKKLKQKQ  120
DSKSNNQELY VTVPKCEEIS VSNLSESENS NVPTLPGLPE SPGRHSPMSP QPSSSSDLST  180
VTETSGATAE TDNIEVENMD SSEMIFPVIN DDFWSEADLF ENSSMELASD IMVPSGFYGN  240
GPTSIDDDMD FWYNLFVIAG GIEELL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1112118LKKKLKQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G31180.15e-65MYB family protein