PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021673180.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family B3
Protein Properties Length: 388aa    MW: 44402.4 Da    PI: 10.2403
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021673180.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B355.79.1e-1820971098
                    HHHTT-EE--HHH.HTT.---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3 10 vlksgrlvlpkkfaeeh.ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98
                     ++++ l++p +f+ ++ +g+k    + +l++  g+ W vk+  ++++    +++GW+eFv++++L +gDf+vF+++g++ f   v+vf+
  XP_021673180.1 20 GFERK-LSIPVSFF-KYlKGQK--CEKAVLRSIAGKLWYVKV--NGCR----FEDGWEEFVRDHDLHVGDFLVFRHEGDMVF--DVMVFD 97
                    55555.********.5547774..458***************..7777....9************************99999..888887 PP
2B361.71.2e-19175259998
                     HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE- CS
              B3   9 dvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfr 98 
                     +++k++   +p+kfa+++g+k+++  +++l+d++grsW  +l y+k++g++++++GW+ F +an+L +gD+++++l++ +++++ +k++r
  XP_021673180.1 175 YNFKQN---VPRKFARANGLKNRR-CKIVLMDQEGRSWPAELGYKKSDGQVYIGQGWNAFRNANDLHAGDSFLLELIK-NGRKPILKMYR 259
                     455555...8********999766.5**************************************************99.66667777765 PP
3B355.88.4e-18292380697
                     ..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTE.EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE CS
              B3   6 tpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgr.yvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvf 97 
                     ++  +lk+++l +p++fa+++g+  ++ ++++l++e+g sW v     k+ ++  ++++GW  F+k+ngL+egD+++++l++  ++++v++++
  XP_021673180.1 292 VKTTHLKKRQLKIPRNFARRNGLC-RKCFKMILTNEKGISWVVSA--GKCTSGdAFIGRGWIAFAKENGLREGDVFMLELVK-GGEKPVMRIY 380
                     5567788899***********988.5779****************..554444499***********************998.6777788775 PP
Sequence ? help Back to Top
Protein Sequence    Length: 388 aa     Download sequence    
MPAGIMPPSK PHFFKPVLPG FERKLSIPVS FFKYLKGQKC EKAVLRSIAG KLWYVKVNGC  60
RFEDGWEEFV RDHDLHVGDF LVFRHEGDMV FDVMVFDPSA CQREYLSFDV KEEIETPEAE  120
EVAKESDLGD LTKNKQVKTT FKGKAVSSVL ERPYFVVNVS FYSARNSRIV THQIYNFKQN  180
VPRKFARANG LKNRRCKIVL MDQEGRSWPA ELGYKKSDGQ VYIGQGWNAF RNANDLHAGD  240
SFLLELIKNG RKPILKMYRL KGNSNKTEKE VTDHTTKAGS FSSRLPHFYV TVKTTHLKKR  300
QLKIPRNFAR RNGLCRKCFK MILTNEKGIS WVVSAGKCTS GDAFIGRGWI AFAKENGLRE  360
GDVFMLELVK GGEKPVMRIY GNLNPCFI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00260.16e-68B3 family protein