![]() |
PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
| Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
| Basic Information? help Back to Top | |||||||||
|---|---|---|---|---|---|---|---|---|---|
| TF ID | XP_021673431.1 | ||||||||
| Organism | |||||||||
| Taxonomic ID | |||||||||
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
|
||||||||
| Family | ERF | ||||||||
| Protein Properties | Length: 232aa MW: 26111.7 Da PI: 8.9123 | ||||||||
| Description | ERF family protein | ||||||||
| Gene Model |
|
||||||||
| Signature Domain? help Back to Top | |||||||
|---|---|---|---|---|---|---|---|
| No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
| 1 | AP2 | 62.8 | 7.2e-20 | 50 | 99 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+W+AeIrdp+ + +r++lg+f tae Aa a+++a+++++g
XP_021673431.1 50 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFETAEAAALAYDEAALRFKG 99
7********.**********94....45***********************9987 PP
| |||||||
| Sequence ? help Back to Top |
|---|
| Protein Sequence Length: 232 aa Download sequence |
MNVMVSALAQ VIGNSQNNPL QVHENPLSNT QGHDEPQQPV QDQENTRRRH YRGVRQRPWG 60 KWAAEIRDPK KAARVWLGTF ETAEAAALAY DEAALRFKGS KAKLNFPERV QGRSELGFLT 120 NRQDLHAGTQ QMTSRVIAPP RPPQTQQEAY TNSFQYPQFL LPVGDYGFNY AVAGGTYSSS 180 ECSSSTTSSS SSSVPSYQQE DLVRFSMQFG NPYSHSNPPA NWRDFDSTHR RE |
| Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
|---|---|---|---|---|---|---|
| Hit ID | E-value | Description | ||||
| AT5G61890.1 | 1e-39 | ERF family protein | ||||




