PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_021673479.1

Organism

Hevea brasiliensis

Taxonomic ID

3981

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea

Family

C2H2

Protein Properties

Length: 519aa MW: 56524.3 Da PI: 8.7284

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_021673479.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	16.1	3.2e-05	90	112	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 + C++C+k F r nL+ H r H XP_021673479.1 90 FICEICNKGFQRDQNLQLHRRGH 112 89*******************88 PP
2	zf-C2H2	13.2	0.00026	166	188	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ XP_021673479.1 166 WKCDKCSKKYAVQSDWKAHTKTC 188 58*******************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 519 aa Download sequence
MSNITGEGGS FSSGNTTAVG EVEVQQQELI INHFNTIASS TTATNTTDGS TTQQPQPSTV 60 KKKRNLPGNP DPSAEVIALS PNALLATNRF ICEICNKGFQ RDQNLQLHRR GHNLPWKLRQ 120 RTSTEIRKRV YVCPELSCVH HNPARALGDL TGIKKHFCRK HGEKKWKCDK CSKKYAVQSD 180 WKAHTKTCGT KEYKCDCGTI FSRRDSFITH RAFCDALTEE NNKANQGLAP NMERNLHGQV 240 PNLISMPINN NQDQSTIISN FNNIDAKIPL PLPHELMPMP PKPSGTIFSS STTSLFGGAR 300 SMSNCSSSLQ LSANSSTIFE GIGHLSAGSA SMSATALLQK AAQMGATASS ADLNCPVTHK 360 SFVTSMTPST FGPMQTSNDQ SQVTAGGNGG FLNQFFNANV GVENSAANDV DIFSGVLDQT 420 SALFKNMEQE NSNDKSLFHG VNSNPGLSAP SRRANPRGLT RFNGDVMTVD FLGVGVSRQS 480 NLHEHQKQEI EFRGIGHPRI RQGLGHFEQT ALEKAMWDV

Sequence ? help Back to Top

Protein Sequence Length: 519 aa Download sequence

MSNITGEGGS FSSGNTTAVG EVEVQQQELI INHFNTIASS TTATNTTDGS TTQQPQPSTV  60
KKKRNLPGNP DPSAEVIALS PNALLATNRF ICEICNKGFQ RDQNLQLHRR GHNLPWKLRQ  120
RTSTEIRKRV YVCPELSCVH HNPARALGDL TGIKKHFCRK HGEKKWKCDK CSKKYAVQSD  180
WKAHTKTCGT KEYKCDCGTI FSRRDSFITH RAFCDALTEE NNKANQGLAP NMERNLHGQV  240
PNLISMPINN NQDQSTIISN FNNIDAKIPL PLPHELMPMP PKPSGTIFSS STTSLFGGAR  300
SMSNCSSSLQ LSANSSTIFE GIGHLSAGSA SMSATALLQK AAQMGATASS ADLNCPVTHK  360
SFVTSMTPST FGPMQTSNDQ SQVTAGGNGG FLNQFFNANV GVENSAANDV DIFSGVLDQT  420
SALFKNMEQE NSNDKSLFHG VNSNPGLSAP SRRANPRGLT RFNGDVMTVD FLGVGVSRQS  480
NLHEHQKQEI EFRGIGHPRI RQGLGHFEQT ALEKAMWDV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G50700.1	1e-101	C2H2 family protein