PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021673519.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MIKC_MADS
Protein Properties Length: 206aa    MW: 23626.5 Da    PI: 8.0582
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021673519.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF77.87.7e-25956148
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklye 48
                    krien   rqvtf+kRr g+lKKA+ELSvLCdae+ v ifss+gk+y+
  XP_021673519.1  9 KRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGVFIFSSHGKFYD 56
                    79********************************************97 PP
2K-box47.57.5e-178618210100
           K-box  10 eeakaeslqqelakLkkeienLq....reqRhllGedL..esLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                     e+++    ++e++ Lkkeie Lq      +R l+G +    ++++ eL  Le++Le  + +iRs+K+e++ ++i+ l++ke  l+ +n++L+ k+
  XP_021673519.1  86 ESTQPLDAKEEINMLKKEIEILQkglrYVNRYLVGGGAahAQMTMDELLILEKNLEIWICHIRSTKMEIMSKEIQLLRNKEGVLKAANQYLQDKI 180
                     5566667899*************6665455778876542279****************************************************9 PP

           K-box  99 ee 100
                     ee
  XP_021673519.1 181 EE 182
                     97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 206 aa     Download sequence    
MARGKVQMKR IENPVHRQVT FCKRRSGLLK KAKELSVLCD AEIGVFIFSS HGKFYDLATN  60
GSMQGLIEKY MKVTGGSLEP DEQAKESTQP LDAKEEINML KKEIEILQKG LRYVNRYLVG  120
GGAAHAQMTM DELLILEKNL EIWICHIRST KMEIMSKEIQ LLRNKEGVLK AANQYLQDKI  180
EETVEITNFE PMTPYPLTIQ NDIFQF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71692.15e-76MIKC_MADS family protein