PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_021673525.1
Organism
Hevea brasiliensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Euphorbiaceae; Crotonoideae; Micrandreae; Hevea
Family MIKC_MADS
Protein Properties Length: 202aa    MW: 23093.9 Da    PI: 7.5031
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_021673525.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF77.97.5e-25956148
                    S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEE CS
          SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklye 48
                    krien   rqvtf+kRr g+lKKA+ELSvLCdae+ v ifss+gk+y+
  XP_021673525.1  9 KRIENPVHRQVTFCKRRSGLLKKAKELSVLCDAEIGVFIFSSHGKFYD 56
                    79********************************************97 PP
2K-box53.31.2e-188617810100
           K-box  10 eeakaeslqqelakLkkeienLqreqRhllGedL..esLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkklee 100
                     e+++    ++e++ Lkkeie Lq+ +R l+G +    ++++ eL  Le++Le  + +iRs+K+e++ ++i+ l++ke  l+ +n++L+ k+ee
  XP_021673525.1  86 ESTQPLDAKEEINMLKKEIEILQKGLRYLVGGGAahAQMTMDELLILEKNLEIWICHIRSTKMEIMSKEIQLLRNKEGVLKAANQYLQDKIEE 178
                     556666789*********************97752268****************************************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 202 aa     Download sequence    
MARGKVQMKR IENPVHRQVT FCKRRSGLLK KAKELSVLCD AEIGVFIFSS HGKFYDLATN  60
GSMQGLIEKY MKVTGGSLEP DEQAKESTQP LDAKEEINML KKEIEILQKG LRYLVGGGAA  120
HAQMTMDELL ILEKNLEIWI CHIRSTKMEI MSKEIQLLRN KEGVLKAANQ YLQDKIEETV  180
EITNFEPMTP YPLTIQNDIF QF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G71692.12e-78MIKC_MADS family protein